Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq34511 389 5e-103 seq92824 360 3e-94 seq24704 116 5e-21 seq14936 113 6e-20 seq19303 111 2e-19 seq100634 100 4e-16 >seq34511 Length=68903 Score = 389 bits (430), Expect = 5e-103 Identities = 654/936 (70%), Gaps = 23/936 (2%) Strand=Plus/Plus Query 39272 TAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTTTT 39328 || ||||| |||| || | |||| ||| || || | |||||| |||||| || | Sbjct 59390 TAGAAGTCTGCATCCAAGGTAAAAGAATTCTCAGCTGGACTTGACATCACTCCCGTTCTC 59449 Query 39329 TGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 39388 || ||||| || || | ||||| || || || ||||| |||||| |||| ||||| ||| Sbjct 59450 TGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCTTCCGATGAGATATTATCC 59509 Query 39389 ATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCAAT 39448 || |||||||| ||||| ||| || | || |||| |||| ||| | || | | Sbjct 59510 ATAAAATCAAATGGATTTTCTGCTCTAAGAATCTTGCTAAAACCTAGTTCCAACATAACT 59569 Query 39449 CTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTA 39508 || ||||| |||||||| ||||| ||||| | ||||||||||| || | || Sbjct 59570 CTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAATTCATTCCAATCAACTTT 59629 Query 39509 ACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCGAT 39568 || |||| ||| || |||| |||||| | ||| || | || || || | ||| || | Sbjct 59630 ACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAACAGCATCGATGATT-TC--T 59686 Query 39569 GTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGTCA 39628 ||||| || || || || | | ||||| |||||||| ||||| || ||| Sbjct 59687 TTTACTTTTTCTTCTGAAGGCTTGTGTACCATGTGTTTGAACATTAAACAGGCAAAATCA 59746 Query 39629 CAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGA 39688 || || | ||||||||||||||||| | ||| || ||||| || | ||||||||||| Sbjct 59747 CAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAAAGTTAATCCAGGCATTAAG 59806 Query 39689 CCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACT 39748 | | || || ||||| ||||||| |||||||| ||||||| |||||| ||||| || Sbjct 59807 TCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGAAAGGAAGATTCCTTCAACA 59866 Query 39749 GCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT-----ATCCACTTCT 39803 |||||||| || ||||| | | | || ||| || | ||| ||||| | Sbjct 59867 GCTGCAAAAGCTACAAGACGC----CATATGTTGCCTC--TCTGTCCCCAATCCATCGCA 59920 Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863 ||||| ||||||||||| || |||||||| | |||| | ||||| |||||| | | Sbjct 59921 ACGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAAGGCATTGAAGAGAAATT 59980 Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923 ||| | || |||| ||| || || || | |||||||||||||| ||| | Sbjct 59981 CCCTTTTTTGGGG-TCCTTAATATAAGTGTCAATAAGGAGACTATACATTTCAACATGTA 60039 Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACAT-CTTGCTTCAGTAATTTGTACCTCT 39982 ||||||| || || || || || || | ||||| | ||||||| | ||||| ||| Sbjct 60040 TGTTTTCCATAGCAATTTGGAAGCC--AGAAACAGGCGAGCTTCAGCGACCTGTACTTCT 60097 Query 39983 GAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCC 40042 | || ||| ||||||||||||| ||||| |||||||| || ||||| || || Sbjct 60098 TGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATCACTTGCTGCAAAGAAAGCT 60157 Query 40043 AATACATGTTTAATAAAATATTT-TTCATCGGGTGTCAATTTATTCCAGTCATTGATATC 40101 || ||||| || || ||||| ||| | | | ||| | | | ||||| | ||||| Sbjct 60158 AACACATGAGATATGAAGTATTTCTTCTTAGACT-TCAGTGTTTCCCAGTGCTGAATATC 60216 Query 40102 TTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTT 40161 || || | ||| || || |||| |||||| || || |||| ||| || || ||||||| Sbjct 60217 CTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCTTTGCTTTCTTATACATGTG 60276 Query 40162 CCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 ||| |||||| | || || || || || |||||||| Sbjct 60277 CCAAATATCATGGTACTGAATGGGGAAGATAACAAA 60312 >seq92824 Length=186084 Score = 360 bits (398), Expect = 3e-94 Identities = 441/601 (73%), Gaps = 7/601 (1%) Strand=Plus/Plus Query 39602 TGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCG 39661 ||||| |||||||| ||||| || ||||| || | ||||||||||||||||| | ||| Sbjct 146041 TGTTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCA 146100 Query 39662 TTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA 39721 || ||||| || | |||||||||| ||| || || |||||||| ||||||| |||||| Sbjct 146101 TTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATATGGATGCAAAA 146160 Query 39722 GATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTT 39781 || |||||||||||||| ||||| || || ||||| || |||| | || || || || Sbjct 146161 GAACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACACGTTCACCATATGTT 146220 Query 39782 GTATCATTATGT-----ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCA 39836 | || | ||| |||||| | ||||| ||||||||||| || |||||||||| Sbjct 146221 GCTTC--TCTGTCCCCAATCCACCGCAAGGCCCAGTCAGCTTTCTTTTTAACACAAGGCA 146278 Query 39837 TTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTA 39896 ||||| || ||||| |||||| | | | |||| | || |||| ||| || || | Sbjct 146279 GCGTTTCAATGGCATTGAAGAGAAATTCTCTTTCTTTGGGGTCCTTAATATAAGTGTCAA 146338 Query 39897 TTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAAC 39956 | | |||||||||||||| ||||| |||||||| || || || || || || || |||| Sbjct 146339 TAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAAC 146398 Query 39957 ATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTA 40016 | | |||||||| | ||||| ||| | || | ||| ||||||||||||| |||| Sbjct 146399 AGCGAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACCAAATTTTCATTTACTA 146458 Query 40017 TTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTG 40076 | |||||||| || ||||| || || || | || || || ||||| || || || Sbjct 146459 TGCCATCACTTGCTGCAAAGAAAGCTAACTCGTGAGATATGAAGTATTTCTCCTCAGGCT 146518 Query 40077 TCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACG 40136 ||| | | | ||||| | ||||| || || | ||| || || ||||| ||||| || | Sbjct 146519 TCAGTGTTTCCCAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGCCGTCCAGAAGG 146578 Query 40137 ACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAA 40196 | |||||||| || || ||||||| ||| || ||| | || || || || || || || | Sbjct 146579 AGGCCTCTGCTTTCTTATACATGTGCCAAATGTCATGGTACTGAATGGGGAAGATGACGA 146638 Query 40197 A 40197 | Sbjct 146639 A 146639 >seq24704 Length=62651 Score = 116 bits (128), Expect = 5e-21 Identities = 103/126 (82%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||||||||| | ||| || ||||| || | |||||||||| ||| || || | Sbjct 10249 CCTCATCTCTACTAATAAGTTCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCT 10190 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 |||||| | |||||| |||||||| |||||||||| ||| ||||| || |||||||| | Sbjct 10189 TGAGCC-AGATATGGATGCAAAAGAACCAGAAAAGACGATTCCTTCAACAGCTGCAAA-G 10132 Query 39759 CAACAA 39764 | |||| Sbjct 10131 CTACAA 10126 Score = 93.3 bits (102), Expect = 6e-14 Identities = 82/100 (82%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724 ||||| || | |||||||||| || || || |||||||| ||||||| |||||||| Sbjct 10070 GAAAAAGTTAACCCAGGCATTAAACT-CG-TTCTTGAGCCAGAATATGGATGCAAAAGAA 10013 Query 39725 CCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAA 39764 |||||||||||||| ||||| || |||||||| || |||| Sbjct 10012 CCAGAAAAGAAGATTCCTTCAACAGCTGCAAAAGCTACAA 9973 Score = 93.3 bits (102), Expect = 6e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 39310 TGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCC 39369 |||||| ||||||||| | || ||||| || || | ||||| || || || ||||| || Sbjct 14411 TGACATCACTCCCATTCTCTGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCC 14352 Query 39370 TTCCAATGATATATTTTCCATGAAATCAAACGGATT 39405 ||||||||| ||||| ||||| |||||||| ||||| Sbjct 14351 TTCCAATGAGATATTCTCCATAAAATCAAATGGATT 14316 >seq14936 Length=40044 Score = 113 bits (124), Expect = 6e-20 Identities = 108/137 (79%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| || || | ||| || || || ||||| |||||||| ||||| | ||| | Sbjct 20546 CCTCATCTCTGCTGATGAGTTCATTGGAGAAAGTGAGACCAGGCATAAGACCTCTCTTCT 20605 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGC-AAAT 39757 | ||||| ||||| ||||||||||| || || ||||| || ||||| || || || ||| Sbjct 20606 TAAGCCAGAATATAGCAGCAAAAGAGCCCGAGAAGAAAATCCCTTCCACAGCAGCAAAAA 20665 Query 39758 GCAACAAGTCTCTCTCC 39774 ||||| | ||| ||||| Sbjct 20666 GCAACCACTCTTTCTCC 20682 Score = 93.3 bits (102), Expect = 6e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 40114 TACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACG 40173 |||||||||||||||||| || || |||| |||| ||| ||||| ||||| || ||| | Sbjct 39864 TACTTCTTCAGCTGTCCAGAAGGATGCCTGGGCCTGTTTATACATCTTCCAGATGTCAGG 39923 Query 40174 ATATTGTATTGGAAAAATAACAAATC 40199 ||| || ||||||||||| ||||||| Sbjct 39924 ATACTGAATTGGAAAAATGACAAATC 39949 >seq19303 Length=70460 Score = 111 bits (122), Expect = 2e-19 Identities = 241/355 (68%), Gaps = 7/355 (2%) Strand=Plus/Minus Query 37348 CCTGTTGATCCAAACCCTTGAGCTCCTCTATCTGTACCATCTAGAGATTGTACTTCATTC 37407 || ||||| ||||| |||| ||||| | || || |||||| ||| || || | Sbjct 43172 CCAGTTGAACCAAAACCTTCTGCTCCACGTTCAGTGTCATCTAAGCCTTGGACCTCTTCA 43113 Query 37408 AGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCGCCCGTATTTATT 37467 || || |||||| | | |||| | | || ||||| || || | || ||| | || | | Sbjct 43112 AGTTCTGGATAAAAAACCCGTTCACAAATCAGCTGGGCAATCCGGTCACCCTTTTTCACT 43053 Query 37468 TTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCCCTATAATCTTCA 37527 | ||| | ||| ||| || | || | || |||| ||| ||||| ||||||||| Sbjct 43052 TCAAATGTTTCTTTGCCAAAGTTAAAGAGTACAACACCAACATTTCCCCTGTAATCTTCA 42993 Query 37528 TCGATTACTCCGCCTCCTACATCAAT---ACCTTTTAGAGACAAACCCGATCTAGGAGCT 37584 || || || || |||| ||||| || | |||| || ||| || || | ||||| Sbjct 42992 TCTATGACACCAGCTCCCACATCTATGAAATGTTTTGCAGCCAAGCCAGAACGTGGAGCA 42933 Query 37585 ATTCTTCCATAACAAAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATTGTCTT 37644 | ||| |||||||| || | ||||||| |||| ||||| || | ||| || ||| Sbjct 42932 ACTCTACCATAACACCCAGGAGGGAGAGACATCTGAATGTCTGTCTTCA-CAA-TGGCTT 42875 Query 37645 TCTCCA-GGAAGG-ATGGTATAATCGTACGCGCTATATAAATCATATCCCGCGGC 37697 |||||| || || || ||| |||| || || || || | || || |||||||| Sbjct 42874 TCTCCATGGCTGGTATTGTACAATCATAGGCACTGTACAGGTCGTAGCCCGCGGC 42820 >seq100634 Length=30925 Score = 100 bits (110), Expect = 4e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 |||||||| || || | || || ||||| ||||| || ||||| || ||||| | ||| Sbjct 3507 TGAAATTCTCCTGACAGGACCCTCCGAGTATAAATGTTGCTGGTGTAAGGTTCGATGGAT 3566 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 |||||||| || | ||| |||||||| || ||||||||||| || || | || ||||| Sbjct 3567 TCATTATTCCCTAAAATCTGAGCAGTAGAGGCAGTTGGCATTGGGGCAAGCAGCAAACTG 3626 Query 68839 TTTCTAAGACCAT 68851 ||||| | |||| Sbjct 3627 TTTCTGATTCCAT 3639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 684524273378040