Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq34511 304 1e-77 seq92824 271 6e-68 seq1233 116 3e-21 seq24704 109 4e-19 seq27176 107 2e-18 seq14936 96.9 3e-15 seq79059 84.2 2e-11 >seq34511 Length=68903 Score = 304 bits (336), Expect = 1e-77 Identities = 643/942 (68%), Gaps = 32/942 (3%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||||| | || || ||||| || ||||| || ||||| ||||| || |||||| |||| Sbjct 60312 TTTGTTATCTTCCCCATTCAGTACCATGATATTTGGCACATGTATAAGAAAGCAAAGGCC 60253 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTGCAT 43817 || || |||||| | || || || ||| | |||| || | ||||| ||| || Sbjct 60252 TCCTTCTGGACAACTGAGGAGGTGGATCTCTCTAAGGATATTCAGCAC--TGGGAAACAC 60195 Query 43818 TAAAACCACAAGAA-AAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGAC 43876 | || | ||||| ||| | || |||||| || || || || ||||| || || || Sbjct 60194 TGAAGTCT-AAGAAGAAATACTTCATATCTCATGTGTTAGCTTTCTTTGCAGCAAGTGAT 60136 Query 43877 GGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCA 43936 || ||||| |||||||||||||| | ||| |||||||| || | | ||||| Sbjct 60135 GGCATAGTTAATGAAAATTTGGTGGAGCAGTTCAGCCAAGAAGTACAGGTCGCTGAAGCT 60076 Query 43937 CGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTT 43996 || | ||| ||| || |||||||| || ||||| || ||| |||||||| ||||| Sbjct 60075 CGCC-TGTTTCTGGCTTCCAAATTGCTATGGAAAACATACATGTTGAAATGTATAGTCTC 60017 Query 43997 CTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056 || || || || || || || || || | | | | | || ||||| | ||| Sbjct 60016 CTTATTGACACTTATATTAAGGACCC-CAAAAAAGGGAATTTCTCTTCAATGCCTTTGAA 59958 Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA---ATTCAAAT 44113 | ||||| ||||| | ||||| |||||||| | |||||| | | | Sbjct 59957 ATGCTACCTTGTGTTAAAAAGAAAGCTGACTGGGCGTTGCGATGGATTGGGGACAGAGAG 59898 Query 44114 GATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173 | | | ||| || ||||| || ||||||| ||| ||||| || ||| |||| || Sbjct 59897 GCAACATATGG----CGTCTTGTAGCTTTTGCAGCTGTTGAAGGAATCTTCCTTTCTGGT 59842 Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233 || ||||| ||||||| ||| |||||||| ||| || |||||||| || || ||||| Sbjct 59841 TCTTTTGCATCCATATTCTGGCTAAAGAAATGAGACTTAATGCCTGGATTAACTTTTTCC 59782 Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293 || || | || ||| | ||||| || || || || |||||||| || || | | | Sbjct 59781 AAGGAACTTATTAGTAGAGATGAGGGTTTGCACTGTGATTTTGCCTGTTTAATGTTCAAA 59722 Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAA--TTACAGATATTGTTGTAGAGGCAG 44351 | | | | || ||||||||| |||| || | | ||| || | | | || | Sbjct 59721 CACATGGTACAC---AAGCCTTCAG--AAGAAAAAGTAAAAGAAATCATCG---ATGCTG 59670 Query 44352 TAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAAT- 44410 | || |||||||| || ||| | || ||| ||||||||||| || || ||||||||| Sbjct 59669 TTAAAATAGAACAGGAGTTTTTAACTGAAGCTTTACCTGTAAAGTTGATTGGAATGAATT 59610 Query 44411 GAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGT 44470 | ||||| ||||| || || ||||||| | ||||| | | | |||||||| ||| Sbjct 59609 GCACTTTA-ATGAAGCAGTACATTGAATTTGTAGCAGACAGAGTTATGTTGGAACTAGGT 59551 Query 44471 TGCGATAA-ACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGA 44529 | || | || || | | |||| || |||||||||||||| ||||| || | ||| Sbjct 59550 TTTAGCAAGATTCT-TAGAGCAGAAAATCCATTTGATTTTATGGATAATATCTCATCGGA 59492 Query 44530 AGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATGAT 44589 ||| ||||| ||||| ||||| || | || |||||||||||| ||| ||| || ||| Sbjct 59491 AGGGAAAACCAACTTCTTTGAGAAGAGAGTAGGAGAATATCAGAGAACGGGAGTGATGTC 59432 Query 44590 AA---CAAGTGACAATAAATTTACTACGGATGAAGATTTCTA 44628 || || ||| ||| ||||| ||||| ||| ||||| Sbjct 59431 AAGTCCAGCTGAGAATTCTTTTACCTTGGATGCAGACTTCTA 59390 >seq92824 Length=186084 Score = 271 bits (300), Expect = 6e-68 Identities = 484/698 (69%), Gaps = 14/698 (2%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 || ||| | || || ||||| || |||||||| ||||| ||||| || |||||| |||| Sbjct 146639 TTCGTCATCTTCCCCATTCAGTACCATGACATTTGGCACATGTATAAGAAAGCAGAGGCC 146580 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTGCAT 43817 || || ||||| || || || || ||| | |||| || | ||||| ||| || Sbjct 146579 TCCTTCTGGACGGCTGAGGAGGTGGATCTCTCTAAGGATATTCAGCAC--TGGGAAACAC 146522 Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877 | || || | || ||| | || |||||| | || || || ||||| || || || | Sbjct 146521 TGAAGCCTGAGGAGAAATACTTCATATCTCACGAGTTAGCTTTCTTTGCAGCAAGTGATG 146462 Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCAC 43937 | ||||| |||||||||||||| ||||| |||||||| || | | ||||| | Sbjct 146461 GCATAGTAAATGAAAATTTGGTGGAGCGGTTCAGCCAAGAAGTACAGGTGACTGAAGCTC 146402 Query 43938 GATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTC 43997 | ||||| ||||| || |||||||| || ||||| || ||||| |||||||| ||||| | Sbjct 146401 GCTGTTTCTATGGCTTCCAAATTGCTATGGAAAACATACATTCTGAAATGTATAGTCTCC 146342 Query 43998 TGATAGATACGTACATCAAAGATGGGCACGAGA-AGCATCGATTGTTTAATGCGATAGAA 44056 | || || || || || || || | || | || || | || ||||| || ||| Sbjct 146341 TTATTGACACTTATATTAAGGACCCCAAAGAAAGAGAAT-TTCTCTTCAATGCCATTGAA 146283 Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAAT 44113 || | ||| ||||| | ||||| ||||||||| | ||||| | | | Sbjct 146282 ACGCTGCCTTGTGTTAAAAAGAAAGCTGACTGGGCCTTGCGGTGGATTGGGGACAGAGAA 146223 Query 44114 GATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173 | | | ||| ||||| |||| || ||||| | ||| ||||| || |||||||| || Sbjct 146222 GCAACATATGGTGAACGTGTTGTAGCTTTTGCGGCTGTTGAAGGAATCTTCTTTTCTGGT 146163 Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233 || ||||| ||||||| ||| | |||||||||||||| ||||||||||| || ||||| Sbjct 146162 TCTTTTGCATCCATATTCTGGCTCAAGAAACGAGGTTTAATGCCTGGGTTAACTTTTTCC 146103 Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293 ||||| | || ||| | ||||| || || || || |||||||| || || | | | Sbjct 146102 AATGAACTTATTAGTAGAGATGAGGGTTTGCACTGTGATTTTGCCTGTTTAATGTTCAAA 146043 Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACA-GATATTGTTGTAGAGGCAGT 44352 | || | | || ||||||||| | | | || || | || ||| | | | || || Sbjct 146042 CACCTGGTACAC---AAGCCTTCA-GCAGAAAAAGTAAAGGAAATTATCATCAATGCTGT 145987 Query 44353 AAAGATAGAACAAGAATTTATGACAACAGCATTACCTG 44390 | |||||||| |||||| |||| ||| || |||| Sbjct 145986 TAGAATAGAACAGGAATTTTTGACTGAAGCTTTGCCTG 145949 >seq1233 Length=18904 Score = 116 bits (128), Expect = 3e-21 Identities = 331/500 (66%), Gaps = 18/500 (4%) Strand=Plus/Plus Query 40863 GAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGAC 40922 ||||| ||| | | || || ||| | || || | | |||||||||| ||| |||| | Sbjct 13408 GAAGGAGATTTGGAACCAGTATATAGCTTCCAATGGAGACATTTTGGGGCAGAATACAAA 13467 Query 40923 ACTATGTACTCTGATTATACCAATA-AAGGAATGGATCAATTACAGTGCGTTATAGATAC 40981 ||| || |||||| || | ||||| |||||||| ||||| | || || || Sbjct 13468 GAGATGAACATAGATTATTCCCAGGCAAGGAGTGGATCAACTACAGAAAGCCATTGACAC 13527 Query 40982 GATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGT 41041 |||||| || || ||| | | | | || ||| ||| | ||||| || | || | Sbjct 13528 AATTAAAACCAGCCCTGAT-GACAAAGATTATTAT-GTGTTCTTGGAATCCTAAAGATCT 13585 Query 41042 ACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGA 41101 | | ||||||| | || || || || | || || || || || || |||||||| Sbjct 13586 TCCTCTGATGGCTCTACCTCCATGCCACACTCTCTGCCAATTCTATGTATGGAATGGTGA 13645 Query 41102 ACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGAC-TAGGGGTCCCGTTTAACA 41160 || || ||||| || || || ||| || || ||| ||| | | || ||| |||| Sbjct 13646 GCTTTCTTGTCAGTTATACCAGCAATCTGGAGATATGTGACCTCAGAGTGATGTTCAACA 13705 Query 41161 TAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTG 41220 | || |||||| | |||||||| || ||||| | ||| |||| | || || |||| Sbjct 13706 TTGCCAGTTATTCCCTGCTCACCTACATGATCACTCACATTACAGTCCTGAAGCCAGGTG 13765 Query 41221 AATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAG 41280 | ||||||||||| | ||||||| ||| | || | ||||| || || || || | Sbjct 13766 ATTTTGTTCACACACTGGGAGATGCTCATCTATATTTGAATCATATTGATCC----ACTG 13821 Query 41281 AACAA-CTGACAC---GAAAACCTAGACCATTTCCAACGCT---ACTTATTAAACGCGCT 41333 || | | || | || |||| ||||| || || | ||| | || || || ||| Sbjct 13822 AAAATTCAGATTCAGTGAGAACCAAGACCTTTCCCTAAGCTCAAAATTCTTTAAAAAGCT 13881 Query 41334 GTTGAAAACATTGATGATTT 41353 | ||| |||||||||||| Sbjct 13882 G---AAATCATTGATGATTT 13898 >seq24704 Length=62651 Score = 109 bits (120), Expect = 4e-19 Identities = 108/139 (78%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || |||||||||||||| ||||| || |||||||| ||||| ||||| ||||| | Sbjct 14314 AAAATCCATTTGATTTTATGGAGAATATCTCATTGGAAGGGAAAACCAACTTCTTTGAGA 14373 Query 44553 AACGCGTTGGAGAATATCAGCGAATGGGCGTCATGATAA---CAAGTGACAATAAATTTA 44609 | | || |||||||||||| ||||||| || ||| || ||| ||| ||| |||| Sbjct 14374 AGAGAGTAGGAGAATATCAGAGAATGGGAGTGATGTCAAGTCCAACTGAGAATTCTTTTA 14433 Query 44610 CTACGGATGAAGATTTCTA 44628 | ||||| ||| ||||| Sbjct 14434 CCTTGGATGCAGACTTCTA 14452 Score = 104 bits (114), Expect = 2e-17 Identities = 105/134 (78%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 || ||||| |||| || ||||||| ||| ||||| || ||||||| || || ||||| Sbjct 10116 GGTGAACGTGTTGTAGC-TTTGCAGCTGTTGAAGGAATCGTCTTTTCTGGTTCTTTTGCA 10174 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 |||||| | || | |||||||||||||| ||||||||||| || ||||| ||||| | Sbjct 10175 TCCATATCT-GGCTCAAGAAACGAGGTTTAATGCCTGGGTTAACTTTTTCCAATGAACTT 10233 Query 44243 ATAAGTCGTGATGA 44256 || ||| | ||||| Sbjct 10234 ATTAGTAGAGATGA 10247 Score = 93.3 bits (102), Expect = 3e-14 Identities = 88/110 (80%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 || ||||| |||| || ||||||| ||| ||||| || |||||||| || || ||||| Sbjct 9963 GGTGAACGTGTTGTAGCTTTTGCAGCTGTTGAAGGAATCTTCTTTTCTGGTTCTTTTGCA 10022 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTC 44232 ||||||| ||| | ||||| |||| ||| ||||||||||| || ||||| Sbjct 10023 TCCATATTCTGGCTCAAGAA-CGAG-TTTAATGCCTGGGTTAACTTTTTC 10070 >seq27176 Length=10081 Score = 107 bits (118), Expect = 2e-18 Identities = 194/279 (70%), Gaps = 6/279 (2%) Strand=Plus/Minus Query 77407 CTTCCAGTTCTTAACCCACTTAGTCACACCATTGATGGTGAACATGCTGTCTGTGTAGAC 77466 ||||||||| ||| |||| | || | |||||| || || ||||| | |||||| | || Sbjct 1430 CTTCCAGTTTTTAGCCCAACTTGTTATACCATTTATAGTAAACATATTATCTGTGAACAC 1371 Query 77467 GACCAGCTTCTTGATTTTGTTCTCCTGAGCTTGTTGCAGTGCTTT--GGATGCAGCCTGG 77524 |||||||| |||| || | | || ||||||| | |||||| ||| |||| || Sbjct 1370 AACCAGCTTACTGATGTTTTGATTCTTGGCTTGTTTGATTGCTTTACGGA--CAGCATGT 1313 Query 77525 ATTTCAGCGCGCTGGTTTGTCTGTTGCCCCACAAGTCGCTCTGCAACATTAAGCGGGTGA 77584 ||||| || | ||||| |||||||||| ||||| || | ||||| || || | Sbjct 1312 ATTTCTGCCCTTTGGTTCGTCTGTTGCCTAGAAAGTCTATCACCCACATTTAGGGGATAG 1253 Query 77585 TTATAACCCCAATATACGCCAATGCCAGCTCGGGCTTGTTTCTGTCCGTTTGATA-AGCA 77643 ||||| || ||||||||||| |||| |||| ||| ||| || || |||| Sbjct 1252 CCTGGCCCCCAGTAGACGCCAATGCCTGCTCCAGCTTTCTTC-CTCCCATTACTAGAGCA 1194 Query 77644 ACAGCCGTCAGTGTAGACCACCACGGCGTCACCCATGTA 77682 | || | || ||||| |||| | | || |||||||| Sbjct 1193 AGAGTCATCTGTGTAAACCAAAGCTACATCTCCCATGTA 1155 >seq14936 Length=40044 Score = 96.9 bits (106), Expect = 3e-15 Identities = 105/139 (76%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 44495 AACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAA 44554 || || |||||||| |||||||||||||| ||||||| |||||||| |||||||||||| Sbjct 15873 AATCCCTTTGATTTCATGGAAAATATTTCTCTGGAAGGGAAAACAAATTTTTTTGAAAAA 15814 Query 44555 CGCGTTGGAGAATATCAGCGAATGGGCGTCATG---ATAACAAGTGACAATAAATTTACT 44611 | || |||||||||||| | | || ||| ||||| |||||| || || Sbjct 15813 AGGGTCTCAGAATATCAGCGTTTTGCAGTTATGGCAGAAACAACGGACAATGTCTTCACA 15754 Query 44612 ACGGATGAAGATTTCTAAT 44630 ||||| |||||| |||| Sbjct 15753 TTGGATGCAGATTTTTAAT 15735 Score = 82.4 bits (90), Expect = 6e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 |||||| | ||||||||||| |||| |||||| ||| | ||||| ||| | || ||||| Sbjct 39947 TTTGTCATTTTTCCAATTCAGTATCCTGACATCTGGAAGATGTATAAACAGGCCCAGGCA 39888 Query 43760 TCATTTTGGACAGCAGAAGAAGT 43782 || || |||||||| |||||||| Sbjct 39887 TCCTTCTGGACAGCTGAAGAAGT 39865 >seq79059 Length=36229 Score = 84.2 bits (92), Expect = 2e-11 Identities = 185/277 (67%), Gaps = 13/277 (5%) Strand=Plus/Minus Query 77407 CTTCCAGTTCTTAACCCACTTAGTCACACCAT-TGATGGTGAACATGCTGTCTGTGTAGA 77465 |||||| | |||||||| | || |||||| | || || ||||| || |||||||||| Sbjct 26485 CTTCCAATCTTTAACCCAACTTGTTACACCAGCTTATAGTAAACATACTATCTGTGTAGA 26426 Query 77466 CGACCAGCTTCTTGATTTTGTTCTCCTGAGCTTGTTGCAGTGCTTTGGATGCAGCCTGGA 77525 |||| ||| |||| || | | || |||| || || ||||||| | || | || | Sbjct 26425 GAACCATCTTACTGATGTTTTGATTCTTGGCTTTTTCCATTGCTTTGCAGGCTGTATGTA 26366 Query 77526 TTTCAGCGCGCTGGTTTGTCTGTTGCCCCACAAGTCGCTCTGCAACATTAAGCGGGTGAT 77585 |||| || ||| |||||| ||||| || | ||||| || || ||| Sbjct 26365 TTTCTGC-----------TCT-TTGCCCAGGAAGTCTATCACCCACATTTAGGGGATGAC 26318 Query 77586 TATAACCCCAATATACGCCAATGCCAGCTCGGGCTTGTTTCTGTCCGTTTGATAAGCAAC 77645 ||||||||||| |||||||| | | | ||| ||| | || ||||| | Sbjct 26317 CTGGCCCCCAATATACTCCAATGCCTGTTTGAACTTTCCTCTTCTCATTACTGAAGCAGC 26258 Query 77646 AGCCGTCAGTGTAGACCACCACGGCGTCACCCATGTA 77682 |||| || ||| | ||||| | || || |||||||| Sbjct 26257 AGCCATCTGTGGAAACCACAGCAGCATCCCCCATGTA 26221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396110769304555