Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq272715 100 2e-16 seq4507 93.3 4e-14 seq8739 89.7 4e-13 >seq272715 Length=527 Score = 100 bits (110), Expect = 2e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || |||| || | |||| || | || || ||||| || ||||| ||||| Sbjct 254 TGCCACCTCGCAGACGAAGCACCAGGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTG 313 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || |||| | || || |||||||| || ||| |||| | |||||| || || || | Sbjct 314 ACAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAAAATCAAACGCTGCTGGTCAGGTG 373 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || ||| || ||| | | || | ||||| ||| || | Sbjct 374 GAATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGA 433 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 | |||||||| || | ||||||||||| || ||||||||||| ||||| |||| Sbjct 434 CCTCTAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 488 >seq4507 Length=158405 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| ||| | || || ||||| || || |||||||| || | |||| | Sbjct 141334 CGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA 141393 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| ||||| || || || | || || | ||| || || || || | ||||||||| Sbjct 141394 TCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTA 141453 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| ||| |||| | || | ||||| ||| || || || || || || Sbjct 141454 TCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 141513 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||||| ||||| || ||||||||||| |||||| Sbjct 141514 GTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATA 141549 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| ||| | || || ||||| || || |||||||| || | |||| | Sbjct 141562 CGCAGGACCAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA 141621 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| ||||| || || || | || || | ||| || || || || | ||||||||| Sbjct 141622 TCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTA 141681 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| ||| |||| | || | ||||| ||| || || || || || || Sbjct 141682 TCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 141741 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||||| ||||| || ||||||||||| |||||| Sbjct 141742 GTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATA 141777 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| ||| | || || ||||| || || |||||||| || | |||| | Sbjct 141790 CGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA 141849 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| ||||| || || || | || || | ||| || || || || | ||||||||| Sbjct 141850 TCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTA 141909 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| ||| |||| | || | ||||| ||| || || || || || || Sbjct 141910 TCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 141969 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||||| ||||| || ||||||||||| |||||| Sbjct 141970 GTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATA 142005 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| ||| | || || ||||| || || |||||||| || | |||| | Sbjct 142018 CGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA 142077 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| ||||| || || || | || || | ||| || || || || | ||||||||| Sbjct 142078 TCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTA 142137 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| ||| |||| | || | ||||| ||| || || || || || || Sbjct 142138 TCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 142197 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||||| ||||| || ||||||||||| |||||| Sbjct 142198 GTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATA 142233 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||| ||| | || || ||||| || || |||||||| || | |||| | ||||| Sbjct 141112 ACCAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 141171 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || || | || || | ||| || || || || | ||||||||||| | Sbjct 141172 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGG 141231 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || ||| |||| | || | ||||| ||| || || || || || || | ||| Sbjct 141232 ATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 141291 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || ||||||||||| |||||| Sbjct 141292 CCTGTCAGGGTCTTCACAAAGATCTGCATA 141321 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| ||| | || || ||||| || || |||||||| || | |||| | Sbjct 142246 CGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCA 142305 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| ||||| || || || | || || | ||| || || || || | ||||||||| Sbjct 142306 TCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTA 142365 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| ||| |||| | || | ||||| ||| || || || || || || Sbjct 142366 TCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 142425 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| ||||| || ||||||||||| ||||| Sbjct 142426 GTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 142460 >seq8739 Length=53120 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| |||| ||||| || | || || ||||| || || |||||||| | Sbjct 865 CCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 806 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | ||| | ||||| ||||| || || || | || || | ||| |||||||| || Sbjct 805 AGGGTACGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCCGGGGGG 746 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || ||||| || ||||| || | | || | ||||| ||| || ||| Sbjct 745 ATGCCTTCTTTGTCTTGAATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACT 686 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| |||| || ||||||||||| ||||| Sbjct 685 TCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 639 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| || || |||||||| | | |||| | ||||| Sbjct 619 ACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGATAGGGTGCGACCATCTTCC 560 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || ||||| | || || | ||| || || || || | || ||||| || | Sbjct 559 AGCTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTCTTGG 500 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| |||| | | || | ||||| ||| || ||||| || || || | ||| Sbjct 499 ATCTTTGCCTTCACGTTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTGATGGTCTTG 440 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| || ||||||||||| ||||| Sbjct 439 CCAGTCAAGGTCTTCACAAAGATCTGCAT 411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423496165834632