Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq70273 95.1 1e-14 >seq70273 Length=8859 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| ||||| |||| || |||| ||| || |||||| || | ||||| || || Sbjct 1201 GTGAAGATGTATCGAGGACTAGCAGAATCTTTCCCACCATGCAGCCTAGTACCAAACTGA 1260 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 ||| | || | ||||||||| || |||||| ||||||||| |||||||||||||| | | Sbjct 1261 CCAATGGGTTGCAAGAGGTTGAGATTGTTGCTGCCCACAAAATTTTGAGCCAAGTTAATA 1320 Query 117425 ATCGT 117429 || || Sbjct 1321 ATGGT 1325 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 |||||||||||||| | || || | ||| || ||||| ||||| || |||||||| Sbjct 1201 GTGAAGATGTATCGAGGACTAGCAGAATCTTTCCCACCATGCAGCCTAGTACCAAACTGA 1260 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148 ||| ||| | | ||||||||| |||||| |||||| ||||| |||||||| || | | Sbjct 1261 CCAATGGGTTGCAAGAGGTTGAGATTGTTGCTGCCCACAAAATTTTGAGCCAAGTTAATA 1320 Query 152149 ATCGT 152153 || || Sbjct 1321 ATGGT 1325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545316401217800