Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_028113.1 Length=35685 Score E Sequences producing significant alignments: (Bits) Value seq229759 390 3e-104 >seq229759 Length=864 Score = 390 bits (432), Expect = 3e-104 Identities = 441/587 (75%), Gaps = 9/587 (2%) Strand=Plus/Plus Query 11063 CTTTAACAACCACGTGCGCACGCTGGTGGCGCGCGAGGAGGTGGCCATCGGGCTGATGCA 11122 ||||| ||||||| || | || || |||| |||||||| |||| || | |||||||| Sbjct 202 CTTTACCAACCACCTGGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCA 261 Query 11123 CCTGTGGGACTTTGTGGAGGCGTTCGTGCACAACCCCGGCAGCAAGGCGCTGACGGCG-C 11181 |||||||||||||| | || | | |||||| |||||| |||| | |||| | Sbjct 262 TCTGTGGGACTTTGTCTTGCCGCTGGAAT-CAACCCAAATAGCAAGCCGCTCATGGCGTC 320 Query 11182 AGCTGTTTCTAATCGTGCAGCACAGTCGCGACAACGAGCTGTTTCGCGACGCCCTGCTAA 11241 ||||| || || |||||||||| ||||||||| || | || || ||||||| Sbjct 321 CTCTGTTCCTTATAGTGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAA 380 Query 11242 ACATCGCCGAGCCCGAGGGCCGGTGGCTGCTGGACCTGATTAACATCTTGCAGAGCATTG 11301 |||| | |||||||||||||| |||||||| || |||| ||||| |||| ||||| | Sbjct 381 ACATAGTAGAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAG 440 Query 11302 TGGTGCAAGAGCGCTCGCTCAGCCTGGCCGACAAGGTGGCGGCCATCAACTATTCGATGC 11361 ||||||| |||||| | | |||||||| ||||||| ||| ||||| |||||||| |||| Sbjct 441 TGGTGCAGGAGCGCACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGC 500 Query 11362 TGAGCCTGGGCAAGTTTTACGCGCGCAAAATCTACCGCAGCCCGTACGTGCCCATCGATA 11421 | | ||||||||||||||| | ||| || |||| | ||| ||||| ||| | | Sbjct 501 TCATTCTGGGCAAGTTTTACTCCCGC-TGATATACCATACCCCTTACGTTCCCTTACACC 559 Query 11422 AGGAGGTGAAGATCGATAGCTTTTACATGCGGATGGCCCTGAAGGTGCTGACGCTGAGCG 11481 | ||||| |||||||| | || |||||||| |||| |||||||||| || ||| || Sbjct 560 ACGAGGTAAAGATCGAGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCG 619 Query 11482 ACGACCTGGGCGTGTACCGCAACGACCGCATTCACAAGGCGGTGAGCGCCAGCCGCCGGC 11541 |||||||| |||| || |||||||| ||||| ||||| || ||||||| ||||| |||| Sbjct 620 ACGACCTGAGCGTTTATCGCAACGAGCGCATCCACAACGCCGTGAGCGTGAGCCGGCGGC 679 Query 11542 GCGAGCTGAGTGACCGGGAGCTGCTGCACAGCCTGCGCCGCGCGTTGGCCGGGGCGGG-- 11599 ||||||| || ||||| |||||| |||||||||||| | || |||| || |||| Sbjct 680 GCGAGCTCAGCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCA 739 Query 11600 ----GGATGCCGAGCGCGAGGCGTACTTTGAGGCGGGGGCGGACCTG 11642 ||| ||| |||| | |||||||| ||||| || |||||| Sbjct 740 GCGACGATAGAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTG 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113694216567354