Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq8739 102 5e-17 seq272715 100 2e-16 seq4507 98.7 6e-16 seq63886 87.8 1e-12 seq5191 82.4 5e-11 >seq8739 Length=53120 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||| | ||||| || || ||| || || || ||||| || || || Sbjct 409 CCACCTCTGAGACGAAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAT 350 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || || || ||||| || || | ||| ||||| || || Sbjct 349 AGGGTGCGACCATCTTCCAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGGGGG 290 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| ||||||| | || ||| | ||| ||||| | |||||| Sbjct 289 ATGCCTTCTTTGTCTTGGATCTTT-GCCTTCACGTTCTCAATGGTGTCACTGGGCTCCAC 231 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | ||| || || || || || || || ||||| ||||||||||| Sbjct 230 TTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAAATCTGCAT 183 >seq272715 Length=527 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| ||||| | ||||| || || ||| ||| || || || ||||| ||||| Sbjct 255 GCCACCTCGCAGACGAAGCACCAGGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGA 314 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || || ||||| || || || || |||||||| ||||| || || Sbjct 315 CAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAAAATCAAACGCTGCTGGTCAGGTGG 374 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| ||| ||| | ||| || | ||| ||||| | ||| | Sbjct 375 AATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGA 433 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | || || || || || || | || |||||||| |||||||| Sbjct 434 CCTCTAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 482 >seq4507 Length=158405 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||||||||||| |||| ||| |||||| ||| || || ||||| || || || Sbjct 141550 CCACCTCTAAGACGCAGGACCAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 141609 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || || || ||||| || | | ||| ||||| || || Sbjct 141610 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 141669 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| || || ||| ||| | || || | ||| ||||| | |||||| Sbjct 141670 ATGCCCTCTTTATCCTGGAT-TTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 141728 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || || || || | || |||||||| |||||||| Sbjct 141729 CTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 141776 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||||||||||| |||| ||| || ||| ||| || || ||||| || || || Sbjct 141322 CCACCTCTAAGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 141381 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || || || ||||| || | | ||| ||||| || || Sbjct 141382 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 141441 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| || || ||| ||| | || || | ||| ||||| | |||||| Sbjct 141442 ATGCCCTCTTTATCCTGGAT-TTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 141500 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || || || || | || |||||||| |||||||| Sbjct 141501 CTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 141548 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||||||||||| |||| ||| || ||| ||| || || ||||| || || || Sbjct 141778 CCACCTCTAAGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 141837 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || || || ||||| || | | ||| ||||| || || Sbjct 141838 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 141897 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| || || ||| ||| | || || | ||| ||||| | |||||| Sbjct 141898 ATGCCCTCTTTATCCTGGAT-TTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 141956 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || || || || | || |||||||| |||||||| Sbjct 141957 CTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 142004 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||||||||||| |||| ||| || ||| ||| || || ||||| || || || Sbjct 142006 CCACCTCTAAGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 142065 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || || || ||||| || | | ||| ||||| || || Sbjct 142066 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 142125 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| || || ||| ||| | || || | ||| ||||| | |||||| Sbjct 142126 ATGCCCTCTTTATCCTGGAT-TTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 142184 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || || || || | || |||||||| |||||||| Sbjct 142185 CTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 142232 Score = 91.5 bits (100), Expect = 9e-14 Identities = 162/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||||||||||| |||| ||| || ||| ||| || || ||||| || || || Sbjct 142234 CCACCTCTAAGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 142293 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || | ||||| || || || || ||||| || | | ||| ||||| || || Sbjct 142294 AAGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 142353 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| || || ||| ||| | || || | ||| ||||| | |||||| Sbjct 142354 ATGCCCTCTTTATCCTGGAT-TTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 142412 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712 |||| ||| || || || || || | || |||||||| |||||||| |||| Sbjct 142413 CTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTGTGAT 142466 >seq63886 Length=20840 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| || ||| | || ||||| ||||| ||||| || | || | ||| ||||| Sbjct 20232 ACCAAATGCAGGGTGTTTTCTTTTTGGATGTTGTAATCAGACAAGGTACTCTCATCTTCT 20173 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || || ||||| || || | ||| || || | || | || || |||||| | Sbjct 20172 AGCTGCTTTCCAGCAAAGATCAACCTCTGCTGTTCTGAGGGGATGCCTTCTTTGTCTTGG 20113 Query 34618 ATCTTTTGTTTTA-ACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 |||||| || | || | | | ||||| | |||||||| | ||| || |||| Sbjct 20112 ATCTTTGCCTTGACACTCTCCA-TGGTGTCACTGGGTTCCACTTCAAGGGTGATGGTTTA 20054 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || ||||||||||||| ||| Sbjct 20053 GCCAGTCAAGGTCTTCACAAAAATCTACAT 20024 >seq5191 Length=73165 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| || ||| |||||||||||||||||||||| | | || | | ||||| || || Sbjct 37778 ATGAAGGGTGGTCTCCTTTTGAATGTTATAATCAGCCAAAGTACATCCTTCTTCTAGCTG 37719 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 ||| || ||||| || || | ||||| || || || | || || || || ||||| Sbjct 37718 TTTGCCTGCAAACATCAATCTTTGTTGATCAGGAGGAATACCTTCTTTATCCTGAATCTT 37659 Query 34623 TTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || | |||| |||||| || ||||| || | ||| || ||||| || | Sbjct 37658 GGCCTTGATCGATTCAATTGTATCAGACAATTCCACATCAAGGGTGATGGTTTTCCCTAT 37599 Query 34683 TAACGTTTTCACAAAAATCTGCATGTTGAT 34712 | || |||||||| |||||||| |||| Sbjct 37598 CAGAGTCTTCACAAATATCTGCATCATGAT 37569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313664365310663