Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq63886 87.8 1e-12 >seq63886 Length=20840 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||| | ||||||||||| || | ||||| || || || |||| || ||| || Sbjct 20024 ATGTAGATTTTTGTGAAGACCTTGACTGGCTAAACCATCACCCTTGAAGTGGAACCCAGT 20083 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| | | | ||||| ||| || ||||||||||| | || || | Sbjct 20084 GACACCATGGAGAGT--GTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCTCAGAAC 20141 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| || ||||| ||||| || | || || || | | |||||| ||||||| Sbjct 20142 AGCAGAGGTTGATCTTTGCTGGAAAGCAGCTAGAAGATGAGAGTACCTTGTCTGATTACA 20201 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||||||||| | ||| |||||||||| | || ||| | || || Sbjct 20202 ACATCCAAAAAGAAAACACCCTGCATTTGGTCCTACGCTTGAGGGGAGG 20250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354657947120097