Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq100566 84.2 2e-11 seq62487 82.4 6e-11 >seq100566 Length=62511 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--AT 101084 || |||| ||||| || |||||||| || || ||||| || | |||| | || || Sbjct 20747 AAGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAG--ATAGGGTGCGACCAT 20804 Query 101085 CTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGT 101144 |||||| || || || ||| | || | ||| || || ||| ||| | ||||||||||| Sbjct 20805 CTTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATGCCTTCTTTGT 20864 Query 101145 CGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAG 101204 | ||| ||| |||||||| | | || || ||| | | ||| | ||| || | Sbjct 20865 CTTGAATCTTTGCTTTCACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTGATGG 20924 Query 101205 TTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 | ||||| ||||| || || | ||| || ||||| Sbjct 20925 TCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 20958 >seq62487 Length=10509 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| ||||| || ||||||||||| || || || || | || || | ||||||| Sbjct 5835 ACCAAGTGCAGGGTGGATTCTTTTTGGATGTTCTAGTCAGACAGGGTATGCCCATCTTCC 5776 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 | || || || ||| | || ||||| || |||||| ||| | |||||||||||| Sbjct 5775 AGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTCTTGG 5716 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209 || ||| || |||| | | || || ||| | | ||| | ||| || || ||| Sbjct 5715 ATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTGATGGTCTTG 5656 Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || ||||| || || | ||| || |||||| Sbjct 5655 CCAGTCAAGGTCTTCACAAAGATCTGCATT 5626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408274260904149