Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq34511 405 4e-108 seq92824 383 1e-101 seq24704 104 2e-17 >seq34511 Length=68903 Score = 405 bits (448), Expect = 4e-108 Identities = 620/877 (71%), Gaps = 19/877 (2%) Strand=Plus/Plus Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319 || ||||| ||||| ||| || ||||| || ||||| ||||| | || ||||| ||| Sbjct 59450 TGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCTTCCGATGAGATATTATCC 59509 Query 4320 ATAAAATCAAACGGATTAGTTGCGTTGT-AATGTTTTTCACACTTTAGAGCTACAAGCAA 4378 ||||||||||| ||||| ||| | ||| || | | || | || | | | | Sbjct 59510 ATAAAATCAAATGGATTTTCTGCTCTAAGAATCTTGCTAAAACCT-AGTTCCAACATAAC 59568 Query 4379 TCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCT 4438 || ||| ||||||||||| || ||||| |||| | ||| || |||||||| || | Sbjct 59569 TCTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAATTCATTCCAATCAACTT 59628 Query 4439 CACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATC 4498 ||||||| || | || |||||||| |||||||| | || || || ||||| || Sbjct 59629 TACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAACAGCATCGATGATT---TC 59685 Query 4499 TTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATC 4558 ||||| ||| |||| || || || | ||| | || | |||| |||||| |||||||| Sbjct 59686 TTTTACTTTTTCTTCTGAAGGCTTGTGTACCATGTGTTTGAACATTAAACAGGCAAAATC 59745 Query 4559 ACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAA 4618 ||| |||||||| || ||||| ||||| ||||| || ||||| |||||||| |||||||| Sbjct 59746 ACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAAAGTTAATCCAGGCATTAA 59805 Query 4619 ACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTAC 4678 ||| || || ||||| ||||| | ||||| || ||||||| ||| || ||||| || Sbjct 59806 GTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGAAAGGAAGATTCCTTCAAC 59865 Query 4679 GGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAA 4738 || ||||| ||||| | || || | | || |||| ||||||| || Sbjct 59866 AGCTGCAAAAGCTACAAGACG----CCATATGTTGCCTCTCTGTCCCCAATCCATCGCAA 59921 Query 4739 TGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA---TAATTT 4795 ||||||| |||||| || ||||| || || | | | | || || || |||| Sbjct 59922 CGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAAGGCATTGAAGAGAAATTC 59981 Query 4796 ACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATG 4855 ||||||| ||||| | |||||||||||| || || || |||||||||||| ||| Sbjct 59982 CCTTTTTT----GGGGTCCTTAATATAAGTGTCAATAAGGAGACTATACATTTCAACATG 60037 Query 4856 TATATTTTCTATAGCAATCTGAAATCC-GTAAAAGCATCTAGCTTCTGTTACTTGAACTT 4914 ||| ||||| |||||||| || || || | || || | |||||| | || || |||| Sbjct 60038 TATGTTTTCCATAGCAATTTGGAAGCCAGAAACAG--GCGAGCTTCAGCGACCTGTACTT 60095 Query 4915 CGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACG 4974 | | | || || || || ||||| || ||||| || ||||| |||||||| || | Sbjct 60096 CTTGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATCACTTGCTGCAAAGAAAG 60155 Query 4975 CCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAAT 5034 | || ||||||||||| ||||| | | | || ||| ||| ||| |||||| | | || Sbjct 60156 CTAACACATGAGATATGAAGTATTTCTTCTTAGACTTCAGTGTTTCCCAGTGCTGAATAT 60215 Query 5035 CTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAG 5094 | |||| | ||| || || ||| ||||| || || || | ||||| || ||||| Sbjct 60216 CCTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCTTTGCTTTCTTATACATGT 60275 Query 5095 ACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131 |||||||||| | |||||||| || | || ||||| Sbjct 60276 GCCAAATATCATGGTACTGAATGGGGAAGATAACAAA 60312 >seq92824 Length=186084 Score = 383 bits (424), Expect = 1e-101 Identities = 496/681 (73%), Gaps = 8/681 (1%) Strand=Plus/Plus Query 4455 GTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTA 4514 |||||||| || |||||||| | || || | |||| || || |||| ||| ||| Sbjct 145963 GTCAAAAATTCCTGTTCTATTCTAACAGCATTGATGATAATTTCCTTTACTTTTTCTGCT 146022 Query 4515 GATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCG 4574 || || || | ||| | || | |||| |||||| ||||||||||| |||||||| || Sbjct 146023 GAAGGCTTGTGTACCAGGTGTTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCA 146082 Query 4575 TCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGC 4634 ||||| ||||| ||||| || ||||| ||||| || ||||||||||||| || || ||| Sbjct 146083 TCTCTACTAATAAGTTCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGC 146142 Query 4635 CAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACT 4694 || ||||| | ||||| || ||||||||||| || ||||| || || ||||| ||||| Sbjct 146143 CAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACA 146202 Query 4695 AATCGGGACCCGAACGA-GCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTT 4753 | || || | | ||| || |||| |||||| || ||||||| |||||| Sbjct 146203 ACACGTTCACCATATGTTGCTT-CTCTGTCCCCAATCCACCGCAAGGCCCAGTCAGCTTT 146261 Query 4754 TTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA---ATTTACTTTTTTCAAATGG 4810 || ||||| || || | || | || || || || | ||| |||| || || Sbjct 146262 CTTTTTAACACAAGGCAGCGTTTCAATGGCATTGAAGAGAAATTCTCTTTCTTTG---GG 146318 Query 4811 GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGC 4870 ||| | |||||||||||| || || || |||||||||||||||||||| ||||| ||||| Sbjct 146319 GTCCTTAATATAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGC 146378 Query 4871 AATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTC 4930 ||| || || || || || || | |||||| || || || ||||| | | || | || Sbjct 146379 AATTTGGAAGCCATAGAAACAGCGAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTC 146438 Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 || || ||||| |||||||| || ||||| |||||||| || || || | |||||||| Sbjct 146439 CACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAGCTAACTCGTGAGATAT 146498 Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAAC 5050 ||||| | || |||||||| ||| ||| |||||| | | ||| |||| | ||| || Sbjct 146499 GAAGTATTTCTCCTCAGGCTTCAGTGTTTCCCAGTGCTGAATATCCTTAGAGAGATCCAC 146558 Query 5051 TTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATA 5110 || ||| | ||||| || || || || ||||| || ||||| |||||| ||| | || Sbjct 146559 CTCCTCAGCCGTCCAGAAGGAGGCCTCTGCTTTCTTATACATGTGCCAAATGTCATGGTA 146618 Query 5111 CTGAATCGGAAGTATGACAAA 5131 |||||| || | ||||| || Sbjct 146619 CTGAATGGGGAAGATGACGAA 146639 >seq24704 Length=62651 Score = 104 bits (114), Expect = 2e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 ||||| | |||||||||||| || || || |||||||||||||||||||| ||||| ||| Sbjct 6764 GGGTCCTTAATATAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATA 6705 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915 ||||| || || || || || || | |||||| || || || ||||| Sbjct 6704 GCAATTTGGAAGCCATAGAAACAGCGAGCTTCAGTCACCTGTACTTC 6658 Score = 96.9 bits (106), Expect = 3e-15 Identities = 96/122 (79%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || ||||| ||||| ||||| || ||||| ||||| || ||||||||||||| || || Sbjct 10247 TCATCTCTACTAATAAGTTCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTG 10188 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 |||| | |||| | ||||| || |||||||||| || ||||| || || ||||| ||| Sbjct 10187 AGCC-AGATATGGATGCAAAAGAACCAGAAAAGACGATTCCTTCAACAGCTGCAAA-GCT 10130 Query 4692 AC 4693 || Sbjct 10129 AC 10128 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 ||| || ||||| |||||||| || ||||| |||||||| || || || ||||||||||| Sbjct 6296 TACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAGCTAACACATGAGATAT 6237 Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040 ||||| | || |||||||| ||| ||| |||||| | | ||| |||| Sbjct 6236 GAAGTATTTCTCCTCAGGCTTCAGTGTTTCCCAGTGCTGAATATCCTTAG 6187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425604206722763