Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq34511 425 8e-114 seq92824 361 8e-95 seq100634 118 1e-21 seq19303 114 2e-20 seq24704 111 2e-19 seq6562 100 4e-16 seq14936 84.2 3e-11 >seq34511 Length=68903 Score = 425 bits (470), Expect = 8e-114 Identities = 661/935 (71%), Gaps = 21/935 (2%) Strand=Plus/Plus Query 47796 TAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTT 47852 || ||||| |||| || | |||| ||| || || || ||||| |||||| || | Sbjct 59390 TAGAAGTCTGCATCCAAGGTAAAAGAATTCTCAGCTGGACTTGACATCACTCCCGTTCTC 59449 Query 47853 TGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 47912 |||||||| || || | ||||| || || || ||||| |||||| |||| ||||| ||| Sbjct 59450 TGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCTTCCGATGAGATATTATCC 59509 Query 47913 ATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGT 47972 ||||||||||||||||| |||| || ||| || |||| |||| ||| | || | | Sbjct 59510 ATAAAATCAAATGGATTTTCTGCTCTAAGAATCTTGCTAAAACCTAGTTCCAACATAACT 59569 Query 47973 CTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 48032 || ||||| || ||||| || || ||||| | ||||||||||| || | || Sbjct 59570 CTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAATTCATTCCAATCAACTTT 59629 Query 48033 ACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGAT 48092 || |||| ||| || || | |||||| ||||| || | |||||||| | ||| || | Sbjct 59630 ACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAACAGCATCGATGATT-TC--T 59686 Query 48093 GTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATGCAAAAT 48150 |||| |||| || || || ||| || ||||| ||||||||||| ||||||| Sbjct 59687 TTTACTTTTTCTTCTGAAGGCTTGTGTAC--CATGTGTTTGAACATTAAACAGGCAAAAT 59744 Query 48151 CACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTA 48210 |||| || | ||| |||||||||||||| | ||| || ||||| || | || ||||||| Sbjct 59745 CACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAAAGTTAATCCAGGCATTA 59804 Query 48211 GTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTA 48270 | | ||| || ||||| ||||| | || ||||| ||||||| ||| || ||||| | Sbjct 59805 AGTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGAAAGGAAGATTCCTTCAA 59864 Query 48271 CGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GTATCCACCGTT 48327 | || ||||| || ||| | || || | || || ||| ||||| || Sbjct 59865 CAGCTGCAAAAGCTACAAG----ACGCCATATGTTGCCTCTCTGTCCCCAATCCATCGCA 59920 Query 48328 GTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGt 48387 ||||| ||||| ||||| || |||||||| | |||| | ||||| |||||||| | Sbjct 59921 ACGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAAGGCATTGAAGAGAAA-T 59979 Query 48388 ttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAA 48447 | || ||| || |||| ||||| || || | |||||||||||||| || | Sbjct 59980 TCCCTTTTTTGGGGTCCTTAATATAAGTGTCAATAAGGAGACTATACATTTCAACATGTA 60039 Query 48448 TATTTTCAATTGCCATCTGAAATCCGTAAAAACA-TCTCGCTTCTGTGATCTGTACCTCC 48506 | ||||| || || || || || || | ||||| | ||||| | || |||||| || Sbjct 60040 TGTTTTCCATAGCAATTTGGAAGCC--AGAAACAGGCGAGCTTCAGCGACCTGTACTTCT 60097 Query 48507 GTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCT 48566 | || | || ||||||| ||||| ||||| |||||||| || ||||| || ||| Sbjct 60098 TGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATCACTTGCTGCAAAGAAAGCT 60157 Query 48567 AATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCT 48626 || ||||| || || ||||| | || || ||||| | | ||||| | ||||| Sbjct 60158 AACACATGAGATATGAAGTATTTCTTCTTAGACTTCAGTGTTTCCCAGTGCTGAATATCC 60217 Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || || | ||| || || |||| |||||| || || |||| |||||| |||||||| | | Sbjct 60218 TTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCTTTGCTTTCTTATACATGTGC 60277 Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 || |||||| ||| || || ||||| |||||||| Sbjct 60278 CAAATATCATGGTACTGAATGGGGAAGATAACAAA 60312 >seq92824 Length=186084 Score = 361 bits (400), Expect = 8e-95 Identities = 440/599 (73%), Gaps = 3/599 (1%) Strand=Plus/Plus Query 48126 TGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCG 48185 ||||| ||||||||||| ||||||||||| || | ||| |||||||||||||| | ||| Sbjct 146041 TGTTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCA 146100 Query 48186 TTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAA 48245 || ||||| || | || ||||||| || ||||| |||||||| ||||| | || ||| Sbjct 146101 TTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATATGGATGCAAAA 146160 Query 48246 GATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTG 48305 || ||||||||||| || ||||| || |||||||| || || | || || || | Sbjct 146161 GAACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACACGTTCACCATATGTT 146220 Query 48306 GCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATT 48362 ||||| ||| |||||||| ||||| ||||| ||||| || |||||||||| Sbjct 146221 GCTTCTCTGTCCCCAATCCACCGCAAGGCCCAGTCAGCTTTCTTTTTAACACAAGGCAGC 146280 Query 48363 GTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATT 48422 ||||| || ||||| |||||||| | | |||| ||| || |||| ||||| || || Sbjct 146281 GTTTCAATGGCATTGAAGAGAAATTCTCTTTCTTTGGGGTCCTTAATATAAGTGTCAATA 146340 Query 48423 AAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACAT 48482 | |||||||||||||| || || || ||||| || || || || || || || ||||| Sbjct 146341 AGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAACAG 146400 Query 48483 CTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATT 48542 | ||||| || | |||||| || | || || || ||||||| ||||||||||| Sbjct 146401 CGAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACCAAATTTTCATTTACTATG 146460 Query 48543 CCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTC 48602 |||||||| || ||||| || ||||| | || || || ||||| || | | || Sbjct 146461 CCATCACTTGCTGCAAAGAAAGCTAACTCGTGAGATATGAAGTATTTCTCCTCAGGCTTC 146520 Query 48603 AGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGAT 48662 ||| | | ||||| | ||||| || || | ||| || || ||||| ||||| || || Sbjct 146521 AGTGTTTCCCAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGCCGTCCAGAAGGAG 146580 Query 48663 GCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 ||||||||||| |||||||| | ||| || ||| ||| || || ||||| || || || Sbjct 146581 GCCTCTGCTTTCTTATACATGTGCCAAATGTCATGGTACTGAATGGGGAAGATGACGAA 146639 >seq100634 Length=30925 Score = 118 bits (130), Expect = 1e-21 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| |||| || || ||||| ||||| || ||||| || ||||| | ||| Sbjct 3507 TGAAATTCTCCTGACAGGACCCTCCGAGTATAAATGTTGCTGGTGTAAGGTTCGATGGAT 3566 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || || ||||| ||||||||||| ||||||||||| || || | || ||||| Sbjct 3567 TCATTATTCCCTAAAATCTGAGCAGTAGAGGCAGTTGGCATTGGGGCAAGCAGCAAACTG 3626 Query 77247 TTTCTGAGACCAT 77259 ||||||| |||| Sbjct 3627 TTTCTGATTCCAT 3639 Score = 86.0 bits (94), Expect = 9e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 || ||||||||||||||||| || ||||| || |||| ||| ||||| | || || || Sbjct 12750 ACACGTTTCATAAAGAGATCCGGGATCCAGAGGGCAAAAAAAAGATCCCTGGCTCGCTGC 12809 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| || || || ||||| || || || || || || | ||||| | |||||||| Sbjct 12810 TCTTCCTTCCCAGTGTTCTTCTTCAGGTCAAGGAATTCAAAGATATCTAAGTGCCATGGC 12869 Query 78123 TC 78124 || Sbjct 12870 TC 12871 >seq19303 Length=70460 Score = 114 bits (126), Expect = 2e-20 Identities = 241/355 (68%), Gaps = 7/355 (2%) Strand=Plus/Minus Query 45877 CCAGTGGATCCAAATCCTTGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCCTTC 45936 ||||| || ||||| |||| || | | |||||| |||||| ||| || || | Sbjct 43172 CCAGTTGAACCAAAACCTTCTGCTCCACGTTCAGTGTCATCTAAGCCTTGGACCTCTTCA 43113 Query 45937 AGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTTATT 45996 || || |||||| | | |||| | | || || || || || | |||||| | || | | Sbjct 43112 AGTTCTGGATAAAAAACCCGTTCACAAATCAGCTGGGCAATCCGGTCACCCTTTTTCACT 43053 Query 45997 TCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCTTCA 46056 |||||| | ||||| ||| || | || | || |||| | || || ||||||||| Sbjct 43052 TCAAATGTTTCTTTGCCAAAGTTAAAGAGTACAACACCAACATTTCCCCTGTAATCTTCA 42993 Query 46057 TCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGGAGCT 46113 ||||| || || |||||||||| || | |||| || || ||||| | ||||| Sbjct 42992 TCTATGACACCAGCTCCCACATCTATGAAATGTTTTGCAGCCAAGCCAGAACGTGGAGCA 42933 Query 46114 ATTCTTCCATAACAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATCTCCTT 46173 | ||| |||||||| || | ||||||| |||| ||||| || | |||| ||| Sbjct 42932 ACTCTACCATAACACCCAGGAGGGAGAGACATCTGAATGTCTGTCTTCA-CAAT-GGCTT 42875 Query 46174 TCTCCA--GGAGGGATAGTATAGTCGTACGCACTGTATAAATCATATCCTGCTGC 46226 |||||| | || || ||| | || || |||||||| | || || || || || Sbjct 42874 TCTCCATGGCTGGTATTGTACAATCATAGGCACTGTACAGGTCGTAGCCCGCGGC 42820 >seq24704 Length=62651 Score = 111 bits (122), Expect = 2e-19 Identities = 116/152 (76%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 47796 TAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTT 47852 || ||||| |||| || | |||| ||| || | || ||||| ||||||||| | Sbjct 14452 TAGAAGTCTGCATCCAAGGTAAAAGAATTCTCAGTTGGACTTGACATCACTCCCATTCTC 14393 Query 47853 TGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 47912 |||||||| || || | ||||| || || || ||||| ||||||||||| ||||| ||| Sbjct 14392 TGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCTTCCAATGAGATATTCTCC 14333 Query 47913 ATAAAATCAAATGGATTAACTGCATTATAAAt 47944 ||||||||||||||||| |||| || |||| Sbjct 14332 ATAAAATCAAATGGATTTTCTGCTCTAAAAAT 14301 Score = 89.7 bits (98), Expect = 7e-13 Identities = 90/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||||||||| | ||| || ||||| || | || ||||||| || ||||| ||| Sbjct 10247 TCATCTCTACTAATAAGTTCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTG 10188 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAA 48280 |||| | |||| | || ||||| |||||||||| || ||||| || || ||||| Sbjct 10187 AGCC-AGATATGGATGCAAAAGAACCAGAAAAGACGATTCCTTCAACAGCTGCAAA 10133 >seq6562 Length=41486 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| || ||||| |||||||| || |||||| ||| |||| || || || || |||| Sbjct 2100 TCCAACCATAGAAGTGCATGCTGGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATAT 2041 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 ||| || ||||| ||||| ||||| || ||||||||||| ||||| || | || || | Sbjct 2040 TCAAAGATTGACTCTGATCAATGAATGCCCCTCTATCAGCTGCCATCTTGAGAACAGTTT 1981 Query 76969 TTTGAGGAATTTCCC 76983 | || | ||||||| Sbjct 1980 TCTGTGAGATTTCCC 1966 >seq14936 Length=40044 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697 |||||||||||||||||| || ||||||| || | ||||||||| ||||| || ||| Sbjct 39864 TACTTCTTCAGCTGTCCAGAAGGATGCCTGGGCCTGTTTATACATCTTCCAGATGTCAGG 39923 Query 48698 GTATTGGATTGGGAAAATAACAAATC 48723 || || ||||| ||||| ||||||| Sbjct 39924 ATACTGAATTGGAAAAATGACAAATC 39949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692257335411040