Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq100566 93.3 4e-14 seq62487 82.4 6e-11 seq8739 82.4 6e-11 >seq100566 Length=62511 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || || ||||| ||||| ||||| ||| | ||| || ||||| Sbjct 20958 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAGT 20899 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | || ||| ||| ||| |||||||||||| | ||| ||||| Sbjct 20898 GACACCATTGAGAATGTGAAAGCAAAGATTCAAGACAAAGAAGGCATCCCCCCAGATCAG 20839 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111277 || ||| | || | ||| || || || |||||||| || | |||| | || || | Sbjct 20838 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGTCGCACCCTAT--CTGACTACA 20781 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 | || || |||||||| || || || || || || ||||| | ||||| Sbjct 20780 ACATCCAGAAAGAATCCACCCTGCACTTGGTCTTTCGTCTCAGAGGTGG 20732 >seq62487 Length=10509 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||| || || ||||| ||||| ||||| ||| | ||| || ||||| Sbjct 5626 AATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAG 5685 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || | ||| | || || ||| || |||||||||||| | ||| || || Sbjct 5686 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCA 5745 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 || ||||| || | ||| || || || |||||||| | || || | || || || Sbjct 5746 GCAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCATACCCTGTCTGACTAGAA 5805 Query 111279 TATACAAAAAGAATCTACACTACATTTAGT 111308 || ||||||||||| || || || || || Sbjct 5806 CATCCAAAAAGAATCCACCCTGCACTTGGT 5835 >seq8739 Length=53120 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || || ||||| ||||| ||||| ||| | ||| || ||||| Sbjct 639 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAGT 698 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | || || ||| ||| |||||||||||| | ||| ||||| Sbjct 699 GACACCATTGAGAATGTCAAGGCAAAGATTCAAGACAAAGAAGGCATCCCCCCGGATCAG 758 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| || | ||| || || || |||||||| || || | || || || Sbjct 759 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGTACCCTGTCTGACTACAAC 818 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCG 111314 || || |||||||| || || || || || |||| Sbjct 819 ATCCAGAAAGAATCCACCCTGCACTTGGTCCTGCG 853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420383536626136