Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_031948.1 Length=31481 Score E Sequences producing significant alignments: (Bits) Value seq229759 89.7 1e-13 >seq229759 Length=864 Score = 89.7 bits (98), Expect = 1e-13 Identities = 202/300 (67%), Gaps = 3/300 (1%) Strand=Plus/Plus Query 10098 ACAGCTTATGAACAAACAGTGAATGAGGAAGTGAACTTTCAGACCTCGTTTAACAACAAT 10157 || || || ||||| || ||||| | | | ||||||| |||||| |||| |||| | Sbjct 156 ACCGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCTC-TTTACCAACCAC 214 Query 10158 GTGCGCACGCTAATAGCCAGAGAGGAAGTGGTGGTAGGGCTGATGCATCTTTGGGACTTT 10217 || | || || | | | ||||| ||| || | ||||||||||| ||||||||| Sbjct 215 CTGGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTTT 274 Query 10218 GTCCAGGCCTATTTAGAGAACCCAATTAGCAAGGCTCTGACAGCA-CAGCTTTTTCTCAT 10276 ||| | || | | ||||||| ||||||| | || | || | || || || || Sbjct 275 GTCTTG-CCGCTGGAATCAACCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTCCTTAT 333 Query 10277 CGTGCAACACTGCAGAGATGAGGGGGTATTACGGGAAAGCTTGCTTAATATTGCAGAGCC 10336 ||||| ||| || || | | || ||| |||| |||| || || | |||||| Sbjct 334 AGTGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCC 393 Query 10337 GGAAAGCAGGTGGCTGGTGGACCTGTTGAACCTGCTGCAGACAATAGTTGTGCAGGAGCG 10396 || || | |||||| | || || | ||| | ||||| | ||||| ||||||||||| Sbjct 394 CGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAGGAGCG 453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100285781455026