Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq92824 282 4e-71 seq34511 246 3e-60 seq24704 91.5 2e-13 >seq92824 Length=186084 Score = 282 bits (312), Expect = 4e-71 Identities = 420/596 (70%), Gaps = 0/596 (0%) Strand=Plus/Plus Query 23497 TTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556 || |||| |||||| ||||||||||| || | || ||||| |||||||| | |||||| Sbjct 146044 TTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCATTG 146103 Query 23557 GAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT 23616 ||||| ||||| || |||||||| |||||||| || | ||| ||||| | ||||| || Sbjct 146104 GAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAA 146163 Query 23617 CCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676 || |||||||| || || |||||||||||||| || |||| |||| |||| ||||||| Sbjct 146164 CCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACACGTTCACCATATGTTGCT 146223 Query 23677 TTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTT 23736 | || |||||| | ||| | ||| ||| ||| ||||| | ||| Sbjct 146224 TCTCTGTCCCCAATCCACCGCAAGGCCCAGTCAGCTTTCTTTTTAACACAAGGCAGCGTT 146283 Query 23737 TCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGT 23796 ||||| || || |||||||| | |||||| || | ||||| || ||||| || Sbjct 146284 TCAATGGCATTGAAGAGAAATTCTCTTTCTTTGGGGTCCTTAATATAAGTGTCAATAAGG 146343 Query 23797 AAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTA 23856 | |||||||||||||||||| || ||||| |||||||| || || ||||| ||||| | | Sbjct 146344 AGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAACAGCGA 146403 Query 23857 GCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCA 23916 ||||||| || || || || | || | | | |||||||| || || || ||| Sbjct 146404 GCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACCAAATTTTCATTTACTATGCCA 146463 Query 23917 TCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAAT 23976 ||||| || ||||||||||| | | | ||| || | | | || |||| | | Sbjct 146464 TCACTTGCTGCAAAGAAAGCTAACTCGTGAGATATGAAGTATTTCTCCTCAGGCTTCAGT 146523 Query 23977 TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCC 24036 ||| ||| | | |||||| || || | ||| || || ||| | ||||| || ||| Sbjct 146524 GTTTCCCAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGCCGTCCAGAAGGAGGCC 146583 Query 24037 AAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092 || ||||||||| ||||||| |||| | || || || || || ||||| Sbjct 146584 TCTGCTTTCTTATACATGTGCCAAATGTCATGGTACTGAATGGGGAAGATGACGAA 146639 >seq34511 Length=68903 Score = 246 bits (272), Expect = 3e-60 Identities = 584/871 (67%), Gaps = 25/871 (3%) Strand=Plus/Plus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCT 23263 ||| || ||| || | |||||||| || || | |||| || || || || || || || | Sbjct 59434 CATCACTCCCGTTCTCTGATATTCTCCTACTC-TCTTCTCAAAGAAGTTGGTTTTCCCTT 59492 Query 23264 CTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTT--TACA 23321 | |||| ||||| |||||||||||||||||||| | || | | | ||| || | Sbjct 59493 CCGATGAGATATTATCCATAAAATCAAATGGATTTTCTGCTCTA-AGA-ATCTTGCTAAA 59550 Query 23322 TGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATA 23381 || |||| | || || ||||||||||||||||| || || ||| ||| | Sbjct 59551 ACCTAGTTCCAACATAACTCTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCA 59610 Query 23382 GTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAAC 23441 || || || || | ||||| || | || ||| ||| || | ||| || ||| Sbjct 59611 ATTCATTCCAATCAACTTTACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAAC 59670 Query 23442 AGCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAA 23501 |||||| | ||| || || | |||||| ||| | | | | || || Sbjct 59671 AGCATCGATGATTTCTTTTACTTT---TTCTTCTGAAGGCTTGTGTACCATGTGTTTGAA 59727 Query 23502 CAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAA 23561 || |||||| ||||||||||| || | || ||||| |||||||| | ||| || ||||| Sbjct 59728 CATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAA 59787 Query 23562 TGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGA 23621 |||||||| |||||||| ||| ||| || | ||| ||||| | ||||| || || || Sbjct 59788 AGTTAATCCAGGCATTAAGTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGA 59847 Query 23622 AAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATA 23681 || ||| || || |||||||| ||||| || |||||||| ||| ||||||| | Sbjct 59848 AAGGAAGATTCCTTCAACAGCTGCAAAAGCTACAAGACG----CCATATGTTGCCTCTCT 59903 Query 23682 ATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAAT 23741 || ||||||| | ||| | ||| ||| ||| ||||| | |||||| Sbjct 59904 GTCCCCAATCCATCGCAACGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAA 59963 Query 23742 TGCTTTTAAGAGAAAAGTTTTTTCTTCATT---ATCTGTTATATATGTATCAATTAGTAA 23798 || || |||||||| || ||| || || | ||||| || ||||| || | Sbjct 59964 GGCATTGAAGAGAAA----TTCCCTTTTTTGGGGTCCTTAATATAAGTGTCAATAAGGAG 60019 Query 23799 ACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGC 23858 ||||||||||||| ||| || ||||| |||||||| || || ||| ||| | | ||| Sbjct 60020 ACTATACATTTCAACATGTATGTTTTCCATAGCAATTTGGAAGCCAGAAACA-GGCGAGC 60078 Query 23859 TTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATC 23918 ||||| | || || || | || | | |||||||| ||||| || ||||| Sbjct 60079 TTCAGCGACCTGTACTTCTTGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATC 60138 Query 23919 ACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATC--AGTTGATAAT 23976 ||| || ||||||||||| |||| || ||| | || |||| || || | | Sbjct 60139 ACTTGCTGCAAAGAAAGC--TAACACATGAGATATGAAGTATTTCTTCTTAGACTTCAGT 60196 Query 23977 TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCC 24036 ||| ||| | | |||||| || || | ||| || || ||| |||||| || ||| Sbjct 60197 GTTTCCCAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCC 60256 Query 24037 AAGGCACGCTTATACATTAGCCAAATATCAT 24067 || ||||||||| |||||||||||| Sbjct 60257 TTTGCTTTCTTATACATGTGCCAAATATCAT 60287 >seq24704 Length=62651 Score = 91.5 bits (100), Expect = 2e-13 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 ||||| || ||||| || | |||||||||||||||||| || ||||| |||||||| || Sbjct 6755 ATATAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGG 6696 Query 23839 AACCCATAAAAACATCTAGCTTCAGACA 23866 || ||||| ||||| | |||||||| || Sbjct 6695 AAGCCATAGAAACAGCGAGCTTCAGTCA 6668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519677713075400