Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq70850 134 2e-26 seq32989 96.9 5e-15 >seq70850 Length=25431 Score = 134 bits (148), Expect = 2e-26 Identities = 143/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 9650 CTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAAA 9709 |||||||||||||| ||| |||| |||||| | ||||||| || ||| |||| Sbjct 1859 CTTACCCCATGTCCTAGTGCTTTTGTGAAGCCTGGGCCTCTGTGATGGTCTGTCTTAAAG 1800 Query 9710 AACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATCG 9769 |||||||| |||||||||||| ||||||| |||||||| | || ||||| |||||||| Sbjct 1799 AACTGGTGAGTGAAATGTTGGGCAAAAAATGCAAACATCATATTTGTGCCTTGGGGATCA 1740 Query 9770 GGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGCTTT 9829 ||| | || |||| | |||||| |||||||||||| | | || || |||| | Sbjct 1739 GGAATAAACTTCCTTCTCAGAAGAAATTTTTCCACAACCACTTTGGATTCAGGAAGCTCT 1680 Query 9830 GTTTTACCT 9838 |||||||| Sbjct 1679 TTTTTACCT 1671 Score = 122 bits (134), Expect = 1e-22 Identities = 199/287 (69%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 8300 AACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATC 8359 || || |||||||| || || | |||| ||| ||||| || | || | |||| || Sbjct 8815 AAGGGGCACCCCTTTACATTATTGCAGATTAGTGACTGGATTGAGGCTGTATTGATAATT 8756 Query 8360 CCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACG 8419 | || || |||||| || || || || |||||||||||| | ||||| ||||| | Sbjct 8755 TCAAAACCTCTGTCTCCACCAAAAGTACTAGGCTTCCAGTACTCAGGGGAACAGATTGGG 8696 Query 8420 TTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAG 8479 || ||||||| |||||||| ||||| || || || | || | ||| |||| || ||| Sbjct 8695 TTACCCATGAGTCCTTTGAGTGAGAAGGGTGCTCCAAGTTCTACCATGGTCTCTCCAAAG 8636 Query 8480 ATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACG 8539 ||||| || || || ||||| || | | | | |||| ||||| ||| || | Sbjct 8635 ATGGCACCTGGGCGAGGTTTTTCTACTAGAAGAGCAGGATACAACTCCATAGCGTCAATA 8576 Query 8540 TCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 || || || || || | || || ||||| || || || |||||||| Sbjct 8575 TCACCATAGAGAGCTTTTAGCTCAGCAGCCATTTCTTTCTCTCCTGT 8529 Score = 107 bits (118), Expect = 3e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315 ||||| |||| || || ||| |||||| ||||| || ||||| || | || ||||| Sbjct 7222 GTCTGCAACAACTGTTCATCATGCCATTCAGGATGCTCCTGTTTAAGGATGTCACACACT 7163 Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375 | ||| || |||| ||||| || || || |||||||| | || || ||||||||||| Sbjct 7162 CGGTTATGCTCCCGAAGCCATATTGTAGCATACATCATCAAACCTGGAACCAGGCCAAAT 7103 Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435 | ||||| || ||||| | | || | || || || | || || || ||||| | Sbjct 7102 ACTTCTTGCCCAACAGCAAATCTCAGATGCTCAGGGACATGAGGTGGGTAAATCATTTCT 7043 Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAAT 9479 ||||| ||||| || |||| ||||| | ||| || ||||| Sbjct 7042 ACCTGTGTATCTTTCACTAAGGGTGGATATACTTCTCCATCAAT 6999 >seq32989 Length=46892 Score = 96.9 bits (106), Expect = 5e-15 Identities = 206/308 (67%), Gaps = 0/308 (0%) Strand=Plus/Minus Query 8279 TCGGGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGA 8338 || || || ||||| | | | | ||||| ||||| ||| ||| || || ||| Sbjct 7172 TCAGGCACACGGAATGAGACATAGGGACATGTTTTGACATTGAGACAAACCAGTTTCTGC 7113 Query 8339 ATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAG 8398 | || || ||||||| || || || | || || || || ||||| ||||||||| Sbjct 7112 AACGTGGCTGTCTTGACAATGTTAAAGCCAATCTCACCACCAAATGTGCTTGGCTTCCAG 7053 Query 8399 TACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAAC 8458 ||| | || || || ||| |||| ||| ||| || ||||||||||| |||||||| | | Sbjct 7052 TACTCAGGAGAACATATGGGGTTCCCCAAGAGCCCCTTGAGGGAGAAGGGAGCCCCAATC 6993 Query 8459 TCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTG 8518 || | || ||||| || ||||| | || || | | || || | | || || | | Sbjct 6992 TCCACCATACTCTCTCCAAAGATAGAATTTGGCAGAGATTTCTCTATAAGTAAGCCTGGG 6933 Query 8519 TACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTT 8578 || | ||||| || || | |||||| || || | || || || | ||| ||| Sbjct 6932 TAGAACTCCAAGGCATCAATGTCTCCATACAGCTCTTCCAGCTCTGCTGAATTCTGCTTC 6873 Query 8579 TCTCCTGT 8586 |||||||| Sbjct 6872 TCTCCTGT 6865 Score = 95.1 bits (104), Expect = 2e-14 Identities = 176/255 (69%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || || || | |||||||| || || || || || ||||| ||| |||| || || Sbjct 40890 TCACCTATGAGGATGAGTCTGGTCGTTTGAAAGAGCTGCTCATCATTCCAGGTGGGGTGC 40831 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 || | ||| | || || || | || |||||||| |||||||| || || |||||| Sbjct 40830 TCAGTTCTCAAGATGTCACAGACACGATTATGTTCCCTAAGCCAGATTGTAGCATACATC 40771 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411 ||||| || || | ||| ||||| ||||||| || ||||||| | | ||| || Sbjct 40770 ATGAGGCCTGGGAGCAGCCCAAACACCTCTTGGCCCACAGCCATCTGGTTAGCTTCAGGA 40711 Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTG--ACCGAGGGGGGATACATTT 9469 || | || ||| || ||||| | | || || |||| | || || || |||||||| | Sbjct 40710 ACATTGGCAGGGTACTTCATG-GAAACTTGA-GTCTCAGCCACTGATGGTGGATACATCT 40653 Query 9470 CACCGTCAATCATCT 9484 | || || | ||||| Sbjct 40652 CCCCATCCACCATCT 40638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 714388242837440