Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq8739 149 2e-30 seq5191 136 9e-27 seq62487 134 3e-26 seq100566 132 1e-25 seq63886 127 5e-24 seq77340 118 3e-21 seq23718 118 3e-21 seq53778 116 9e-21 seq38097 100 7e-16 >seq8739 Length=53120 Score = 149 bits (164), Expect = 2e-30 Identities = 159/207 (77%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || ||||||||||| || | || || || || |||||||| || |||| ||| || | Sbjct 186 CAGATTTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTGG--AGCCCAGTG 243 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| || |||||| || ||||||||||| ||||| || ||||||| Sbjct 244 ACACCATTGAGAACGTGAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAGC 303 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | ||||| || ||||| ||||| |||||||| | || || | || || ||| Sbjct 304 AGAGATTGATCTTTGCTGGAAAGCAGCTGGAAGATGGTCGCACCCTATCTGACTACAACA 363 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 |||| |||||||| || ||||| |||| Sbjct 364 TCCAGAAAGAATCCACCCTGCA-CTTG 389 Score = 140 bits (154), Expect = 8e-28 Identities = 157/207 (76%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || | || || || || |||||||| || || || || ||| Sbjct 414 CAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGA--GCCCAGTG 471 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| || |||||| || ||||||||||| ||||| || ||||||| Sbjct 472 ACACCATTGAGAACGTGAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAGC 531 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | |||| ||||| ||||| || ||||| |||||||| | || || | || || ||| Sbjct 532 AGAGACTGATCTTTGCCGGGAAGCAGCTGGAAGATGGTCGCACCCTATCTGACTACAACA 591 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 |||| |||||||| || ||||| |||| Sbjct 592 TCCAGAAAGAATCCACCCTGCA-CTTG 617 Score = 140 bits (154), Expect = 8e-28 Identities = 157/207 (76%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || | || || || || |||||||| || || || || ||| Sbjct 642 CAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGA--GCCCAGTG 699 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| ||||| ||||||||| ||||||||||| ||||| ||||| |||| Sbjct 700 ACACCATTGAGAATGTCAAGGCAAAGATTCAAGACAAAGAAGGCATCCCCCCGGATCAGC 759 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || ||||| ||||| |||||||| | || || | || || ||| Sbjct 760 AGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGTACCCTGTCTGACTACAACA 819 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 |||| |||||||| || ||||| |||| Sbjct 820 TCCAGAAAGAATCCACCCTGCA-CTTG 845 Score = 113 bits (124), Expect = 1e-19 Identities = 123/162 (76%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||| ||||| || || |||||| || ||||||||||| ||||| || |||||| Sbjct 16 GACACCATTGAGAATGTGAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 75 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | ||||| || ||||| ||||| |||||||| | || || | || || ||| Sbjct 76 CAGAGATTGATCTT-GCTGGAAAGCAGCTAGAAGATGGGCGTACCCTGTCTGACTACAAC 134 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||||||||| || || | || || | |||||| Sbjct 135 ATCCAGAAAGAATCAACTCTTCACTTGGTCTTTCGTCTCAGA 176 >seq5191 Length=73165 Score = 136 bits (150), Expect = 9e-27 Identities = 165/222 (74%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 177918 ATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGC 177977 ||| | || || || ||||| ||||| | ||| ||||| |||||||| || |||||| Sbjct 37572 ATGATGCAGATATTTGTGAAGACTCTGATAGGGAAAACCATCACCCTTGATGTGGAATTG 37631 Query 177978 TCAGACACCATCGAGAACG-TCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGA 178036 || || || || || | || |||| ||||||||||| |||||||| || ||||| || Sbjct 37632 TCTGATACAATTGA-ATCGATCAAGGCCAAGATTCAGGATAAAGAAGGTATTCCTCCTGA 37690 Query 178037 CCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 || ||| || | || || || || |||||||| ||||| ||| | ||| | || ||||| Sbjct 37691 TCAACAAAGATTGATGTTTGCAGGCAAACAGCTAGAAGAAGGATGTACTTTGGCTGATTA 37750 Query 178097 TAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 |||| | ||||| || | || || ||||||| ||||||| Sbjct 37751 TAACATTCAAAAGGAGACCACCCTTCATCTTGCCCTGAGACT 37792 >seq62487 Length=10509 Score = 134 bits (148), Expect = 3e-26 Identities = 156/207 (75%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || | || || || || |||||||| || || || || ||| Sbjct 5630 CAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGA--GCCCAGTG 5687 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| ||||| |||||| || ||||||||||| ||||| || ||||||| Sbjct 5688 ACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAGC 5747 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || ||||| ||||| |||||||| || || | || || ||| Sbjct 5748 AGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCATACCCTGTCTGACTAGAACA 5807 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 ||||||||||||| || ||||| |||| Sbjct 5808 TCCAAAAAGAATCCACCCTGCA-CTTG 5833 >seq100566 Length=62511 Score = 132 bits (146), Expect = 1e-25 Identities = 163/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || | || || || || |||||||| || || || || ||| Sbjct 20955 CAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGA--GCCCAGTG 20898 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| || ||| ||||||||| ||||||||||| ||||| || || |||| Sbjct 20897 ACACCATTGAGAATGTGAAAGCAAAGATTCAAGACAAAGAAGGCATCCCCCCAGATCAGC 20838 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| || ||||| ||||| |||||||| | || || | || || ||| Sbjct 20837 AGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGTCGCACCCTATCTGACTACAACA 20778 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| |||||||| || ||||| | || || | |||||| Sbjct 20777 TCCAGAAAGAATCCACCCTGCACTTGGTCTTTCGTCTCAGA 20737 Score = 131 bits (144), Expect = 4e-25 Identities = 155/207 (75%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || | || || || || |||||||| || || || || ||| Sbjct 20727 CAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGA--GCCCAGTG 20670 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| || || |||||| || ||||||||||| ||||| || ||||||| Sbjct 20669 ACACCATTGAGAATGTGAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAGC 20610 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | ||||| || ||||| ||||| |||||||| | || || | || || ||| Sbjct 20609 AGAGATTGATCTTTGCTGGAAAGCAGCTAGAAGATGGGCGTACCCTGTCTGACTACAACA 20550 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 |||| ||||||||||| || || |||| Sbjct 20549 TCCAGAAAGAATCAACTCTTCA-CTTG 20524 Score = 131 bits (144), Expect = 4e-25 Identities = 155/207 (75%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || | || || || || |||||||| || || || || ||| Sbjct 21183 CAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGA--GCCCAGTG 21126 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| ||||| || ||||||||||| ||||| |||||||| ||||||| Sbjct 21125 ACACCATTGAGAATGTCAAGGCCAAAATTCAGGACAAGGAAGGCATCCCTCCAGACCAGC 21066 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | || || ||||| || ||||| |||||||| | || || | || || ||| Sbjct 21065 AGAGATTGATTTTTGCCGGGAAGCAGCTGGAAGATGGTCGCACCCTATCTGACTACAACA 21006 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 |||| |||||||| || ||||| |||| Sbjct 21005 TCCAGAAAGAATCCACCCTGCA-CTTG 20980 >seq63886 Length=20840 Score = 127 bits (140), Expect = 5e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986 ||||| ||||| || | || || |||| |||||||| || |||||| | |||||| Sbjct 20030 ATTTTTGTGAAGACCTTGACTGGCTAAACCATCACCCTTGAAGTGGAACCCAGTGACACC 20089 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 || |||| ||||| |||||| || ||||||||||| ||||| | || ||||| | Sbjct 20090 ATGGAGAGTGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCTCAGAACAGCAGAGG 20149 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCA 178105 | ||||| || ||||| ||||| ||||||| || || |||| | ||||| ||| |||| Sbjct 20150 TTGATCTTTGCTGGAAAGCAGCTAGAAGATGAGAGTAC-CTTGTCTGATTACAACATCCA 20208 Query 178106 AAAAGAATCAACACTGCAT 178124 ||||||| || |||||| Sbjct 20209 AAAAGAAAACACCCTGCAT 20227 >seq77340 Length=225708 Score = 118 bits (130), Expect = 3e-21 Identities = 150/202 (74%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG--ACACC 177986 |||| |||| || | || || || || |||||||| || | || |||||| ||||| Sbjct 218585 TTTC-TGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGCAGA--GCTCAGTGACACC 218641 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 || ||||| ||||| |||||| || ||||||||||| ||||| || || ||||| | Sbjct 218642 ATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAGCAGAGG 218701 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 || ||||| || ||||| ||| | |||||||| | || || | || || ||| |||| Sbjct 218702 CTGATCTTTGCTGGAAAGCAGTTGGAAGATGGGCGTACCCTGTCTGACTACAACATCCAG 218761 Query 178107 AAAGAATCAACACTGCATCTTG 178128 ||| |||| || ||||| |||| Sbjct 218762 AAAAAATCCACCCTGCA-CTTG 218782 >seq23718 Length=96463 Score = 118 bits (130), Expect = 3e-21 Identities = 150/205 (73%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||| |||| ||| | || || || || |||||| | || ||||| | | ||| Sbjct 37147 CAGATTTTCATGAAGACTTTGACTGGCAAGACCATCACCTTTGAAGTGGAGACCAGTGAC 37206 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||| |||| ||||| |||||| || ||||||||||| ||||| || || ||||| Sbjct 37207 ACCACTAAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAGCAG 37266 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| || ||||| ||||| |||||||| || || | || || ||| || Sbjct 37267 AGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCATACCCTGTCTGACTACAACATC 37326 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 | |||||||| || || || |||| Sbjct 37327 CGGAAAGAATCCACCCTACA-CTTG 37350 >seq53778 Length=21761 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| | | | |||||||| || |||||||| ||| | ||| || || Sbjct 17594 CAGATTTTCGTGAAGATTTTGACAGGAAAGACCATCACCCTTGAGATTGAACCGTCGGAT 17535 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| ||||| || || || |||| | || || || || ||| Sbjct 17534 ACTATTGAAAATGTCAAAGCCAAGATACAAGATAAGAAAGGTACTCCCCCTGATCAACAA 17475 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || || ||||| ||||||||| | ||| | | || || ||| | Sbjct 17474 AGATTGATTTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCAGACTACAACATT 17415 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135 || || ||||| || || ||||||||| |||| Sbjct 17414 CAGAAGGAATCTACCCTTCATCTTGTTCTGAG 17383 >seq38097 Length=51517 Score = 100 bits (110), Expect = 7e-16 Identities = 146/205 (71%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || | || || || || || || || ||||| | | ||| Sbjct 49358 CAGATCTTTGTGAAGACCTTGACTGGCAAGACCATTGTTCTTGAAGTGGAGCCCACTGAC 49417 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| ||||| |||||| ||||||||||||| || || || || ||| | Sbjct 49418 ACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAAGTCATTCCCCCAGATCAGTAG 49477 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| ||| |||| ||||| ||||||| | || || | || || ||| || Sbjct 49478 AGGTTGATCTTTGCCAGAAAGCAGCTGGAAGATGAGTGTACCCTGCCTGACTACAACATC 49537 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || |||||||| ||||||| |||| Sbjct 49538 CAGAAAGAATCCCCACTGCA-CTTG 49561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1199448117122934