Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq4507 138 1e-27 seq8739 105 6e-18 >seq4507 Length=158405 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 || ||| || | ||||||| |||||||| || ||| ||| ||||| ||||| ||||| Sbjct 141090 ACAGCCCCCCCTAAGACGTAGGACCAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTC 141149 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || |||||||| | || || ||||||||||| || || ||||| | ||| ||||| | Sbjct 141150 AGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGG 141209 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTC 41811 ||| | || ||| || ||| |||||| ||||| | | ||||| || | ||| Sbjct 141210 GGGGATGCCCTCTTTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTC 141269 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || || || || ||||| ||||| || || |||||||| Sbjct 141270 CACCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 141320 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||||||| || ||| ||| ||||| ||||| ||||| || |||||||| Sbjct 141331 AGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGG 141390 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || ||||| | ||| ||||| | ||| | || ||| Sbjct 141391 CCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCT 141450 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| |||||| ||||| | | ||||| || | ||||||||||| || Sbjct 141451 TTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTG 141510 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| ||||| || || |||||||| Sbjct 141511 ATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 141548 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||||||| || ||| ||| ||||| ||||| ||||| || |||||||| Sbjct 141559 AGACGCAGGACCAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGG 141618 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || ||||| | ||| ||||| | ||| | || ||| Sbjct 141619 CCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCT 141678 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| |||||| ||||| | | ||||| || | ||||||||||| || Sbjct 141679 TTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTG 141738 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| ||||| || || |||||||| Sbjct 141739 ATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 141776 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||||||| || ||| ||| ||||| ||||| ||||| || |||||||| Sbjct 141787 AGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGG 141846 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || ||||| | ||| ||||| | ||| | || ||| Sbjct 141847 CCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCT 141906 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| |||||| ||||| | | ||||| || | ||||||||||| || Sbjct 141907 TTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTG 141966 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| ||||| || || |||||||| Sbjct 141967 ATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 142004 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||||||| || ||| ||| ||||| ||||| ||||| || |||||||| Sbjct 142015 AGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGG 142074 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || ||||| | ||| ||||| | ||| | || ||| Sbjct 142075 CCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCT 142134 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| |||||| ||||| | | ||||| || | ||||||||||| || Sbjct 142135 TTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTG 142194 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| ||||| || || |||||||| Sbjct 142195 ATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 142232 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||||||| || ||| ||| ||||| ||||| ||||| || | |||||| Sbjct 142243 AGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAAGGTGCGG 142302 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || ||||| | ||| ||||| | ||| | || ||| Sbjct 142303 CCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCT 142362 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| |||||| ||||| | | ||||| || | ||||||||||| || Sbjct 142363 TTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTG 142422 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| ||||| || || |||||||| Sbjct 142423 ATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 142460 >seq8739 Length=53120 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||| ||||| ||| || ||||| ||||| ||||| || |||||||| Sbjct 400 AGACGAAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGATAGGGTGCGA 341 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| || || || |||| | ||| ||||| | ||| | || || Sbjct 340 CCATCTTCCAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCTTCT 281 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 ||||| ||| ||| ||||| | | ||||| || | |||||| || | || Sbjct 280 TTGTCTTGGATCTTTGCCTTCACGTTCTCAATGGTGTCACTGGGCTCCACTTCAAGGGTG 221 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || |||| ||||| |||||||||||||| Sbjct 220 ATGGTCTTGCCAGTCAAGGTCTTCACGAAAATCTGCAT 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460699163673200