Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq36 188 1e-42
seq179 93.3 6e-14
>seq36
Length=18184789
Score = 188 bits (208), Expect = 1e-42
Identities = 418/625 (67%), Gaps = 4/625 (1%)
Strand=Plus/Minus
Query 69896 CCTCTGTTGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAGCTCTTGTGGATG 69955
||| || |||| |||||| ||| || ||||| || | |||||||| ||||| |
Sbjct 7686507 CCTTTGCTGACAACCAAGCGTGTGTTCTGGAAGGGTGTGCTGGAGGAGCTGCTGTGGTTT 7686448
Query 69956 ATTTCCGGATCGACCAATGCCAAAGAGCTGA--GCCGAAAGGGTGTACACATTTGGAGCG 70013
||| || || || ||||| || ||||| ||| || || ||| | || ||| ||
Sbjct 7686447 ATTAAGGGTTCCACAAATGCTAAGGAGCTCTCTGCCAAA--GGAGTAAAAATCTGGGACG 7686390
Query 70014 GCAACAGTAGTCGAAGCGTTTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATC 70073
||| | |||| | ||||||| || || ||||| |||| | || || |||
Sbjct 7686389 CCAATGGATCTCGAGACTTTTTGGACAAGCAGGGGTTCACTACCAGAGAGGAAGGAGATT 7686330
Query 70074 TGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGA 70133
|||| |||||||| || ||||||||||| || | || | | || ||| | |
Sbjct 7686329 TGGGACCAGTGTATGGCTTCCAGTGGAGACATTTTGGGGCAGAATACAAAGAGATGAATA 7686270
Query 70134 CAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCA 70193
|||| ||||| || || || || |||||| | || | | |||||||||| |||| ||||
Sbjct 7686269 CAGATTATTCTGGACAAGGAGTGGATCAACTACAAAAAGTCATTGACACAATCAAAACCA 7686210
Query 70194 ATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGG 70253
|||| || || |||||| | ||||| | ||||||||| |||| | | | ||||
Sbjct 7686209 ATCCTCATGACAGAAGGATCATTATGTGTGCTTGGAATCCTAAAGATCTTCCTCTGATGG 7686150
Query 70254 CACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATGCT 70313
|| |||| || || ||| | | |||||| || | |||| | | || ||
Sbjct 7686149 CATTACCTCCATGCCACGCTCTCTGTCAGTTCTATGTATTGAATGGTGAGCTTTCTTGTC 7686090
Query 70314 TAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATT 70373
| || ||| | || || |||||||| || || || || |||||||| || || |
Sbjct 7686089 AGCTATACCAGCGATCTGGAGATATGGGCCTTGGGGTGCCGTTCAACATTGCCAGTTACT 7686030
Query 70374 CTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACA 70433
| || | || ||||||||||||| | || |||||||| | || || |||||||
Sbjct 7686029 CCCTGCTAACCTACATGATTGCTCATGTCACAGGCCTGAAGCCAGGTGATTTTGTACACA 7685970
Query 70434 CCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAAC 70493
| | || || ||||| | || || ||||| || | |||| | || | || || | |
Sbjct 7685969 CTCTGGGAGATGCTCATATATACTTGAATCATATTGGGCCACTGAAAATTCAGCTTCAGC 7685910
Query 70494 GGGAGCCGAGACCTTTTCCCAAGCT 70518
| || || |||||||| || |||||
Sbjct 7685909 GAGAACCAAGACCTTTCCCTAAGCT 7685885
>seq179
Length=6459238
Score = 93.3 bits (102), Expect = 6e-14
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 96891 CGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATC 96950
|||||||| || | ||| ||||||||||||| |||||| ||| ||||||| ||| |
Sbjct 3630736 CGGCCAGGGGCATTTGCCATCTACTTGGAACCATGGCACTTAGACATTTTTGAATTTCTT 3630677
Query 96951 GAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTC 97010
|| || || ||| |||| |||||| ||||||||||| | |||| ||| |||
Sbjct 3630676 GATCTGAAGAAGAACACTGGGAAGGAAGAGCAGCGAGCCAGGGATCTTTTTTTTGCCCTC 3630617
Query 97011 TGGGTGCCAGATTTGTTCATGAAGCGCGT 97039
||| | |||||| | || ||||| || ||
Sbjct 3630616 TGGATCCCAGATCTCTTTATGAAACGGGT 3630588
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741041544264560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |