Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq36 109 7e-19
>seq36
Length=18184789
Score = 109 bits (120), Expect = 7e-19
Identities = 274/411 (67%), Gaps = 8/411 (2%)
Strand=Plus/Plus
Query 6829 ATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATA 6888
||||||| || || |||||||||||||| || || || | ||| |||||||| ||||
Sbjct 7685936 ATATGATTCAAGTATATATGAGCATCTCCCAGAGTGTGTACAAAATCACCTGGCTTCAGG 7685995
Query 6889 TCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACA 6948
| | |||||||| | || |||| | | ||| || | || || || ||
Sbjct 7685996 CCTGTGACATGAGCAATCATGTAGGTTAGCAGGGAGTAACTGGCAATGTTGAACGGCACC 7686055
Query 6949 CCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAA---AATATTGTCTATA 7005
|| | ||||||||| | |||| || || |||||||| | | ||| | |||
Sbjct 7686056 CCAAGGCCCATATCTCCAGATCGCTGGTATAGCTGACAAGAAAGCTCACCATT--CAATA 7686113
Query 7006 GCATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGA 7065
|||| || ||||| | | || ||||||||||| | | || | ||| |||
Sbjct 7686114 -CATAGAACTGACAGAGAGCGTGGCATGGAGGTAATGCCATCAGAGGAAGATCTTTAGGA 7686172
Query 7066 TTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGT-TATAAT 7124
||||||||| ||| | || | ||| |||| ||| ||| |||| ||| ||| || |
Sbjct 7686173 TTCCAAGCACACATAATGATCCTTCTGTCATGAGGA-TTGGTTTTGATTGTGTCAATGAC 7686231
Query 7125 TATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGC 7184
| |||||| |||||| | || || || ||||| |||| | | | || | ||
Sbjct 7686232 TTTTTGTAGTTGATCCACTCCTTGTCCAGAATAATCTGTATTCATCTCTTTGTATTCTGC 7686291
Query 7185 TCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTC 7235
|||||||||||||| || || ||||| | || || ||||| ||||| ||
Sbjct 7686292 CCCAAAATGTCTCCACTGGAAGCCATACACTGGTCCCAAATCTCCTTCCTC 7686342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595857803349600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |