Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq36 179 1e-39
>seq36
Length=18184789
Score = 179 bits (198), Expect = 1e-39
Identities = 410/613 (67%), Gaps = 8/613 (1%)
Strand=Plus/Minus
Query 111315 TTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGG 111374
||||| | || ||||| ||||| | |||||||| | | || || || ||||||
Sbjct 7686510 TTTCCTTTGCTGACAACCAAGCGTGTGTTCTGGAAGGGTGTGCTGGAGGAGCTGCTGTGG 7686451
Query 111375 TTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGAT 111434
|||||| || |||||||| || || || | || ||| |||||||| |||||
Sbjct 7686450 TTTATTAAGGGTTCCACAAATGCTAAGGAGCTCTCTGCCAAAGGAGTAAAAATCTGGGAC 7686391
Query 111435 GGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGA-CAACGAAGAAGGTGA 111493
| |||||||| || |||||| | || || || || | | || || ||||| ||
Sbjct 7686390 GCCAATGGATCTCGAGACTTTTTGGA-CAAGCAGGGGTTCACTACCAGAGAGGAAGGAGA 7686332
Query 111494 TCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCA 111553
| | |||||||| || || || || ||| | || ||||| ||||| |||||| |||
Sbjct 7686331 TTTGGGACCAGTGTATGGCTTCCAGTGGAGACATTTTGGGGCAGAATACAAAGAGATG-- 7686274
Query 111554 CGACTCATATGATTC---ACAGGGAACTGATCAATTACAGAATGTCATTGATCAAATTAA 111610
| || || |||| ||| ||| |||||| |||| || |||||||| ||| ||
Sbjct 7686273 -AATACAGATTATTCTGGACAAGGAGTGGATCAACTACAAAAAGTCATTGACACAATCAA 7686215
Query 111611 GAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAAAA 111670
| ||| || | | | || |||||| |||| ||||| || || | |
Sbjct 7686214 AACCAATCCTCATGACAGAAGGATCATTATGTGTGCTTGGAATCCTAAAGATCTTCCTCT 7686155
Query 111671 AATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTC 111730
|||||| | || ||||| || | | || ||||| |||||| | || ||||||
Sbjct 7686154 GATGGCATTACCTCCATGCCACGCTCTCTGTCAGTTCTATGTATTGAATGGTGAGCTTTC 7686095
Query 111731 ATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAG 111790
|| || | || |||||||||| ||||| || ||||| || ||||| || ||||| ||
Sbjct 7686094 TTGTCAGCTATACCAGCGATCTGGAGATATGGGCCTTGGGGTGCCGTTCAACATTGCCAG 7686035
Query 111791 TTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCAT 111850
|||| | || || || | | | || |||||| | ||| || || || ||||| || |
Sbjct 7686034 TTACTCCCTGCTAACCTACATGATTGCTCATGTCACAGGCCTGAAGCCAGGTGATTTTGT 7685975
Query 111851 TCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGATGCACTTAAAACACAGTT 111910
||| | | |||||||| ||| | ||| || || |||| |||| |||| ||| |
Sbjct 7685974 ACACACTCTGGGAGATGCTCATATATACTTGAATCATATTGGGCCACTGAAAATTCAGCT 7685915
Query 111911 GAAGCGCAAACCA 111923
|||| |||||
Sbjct 7685914 TCAGCGAGAACCA 7685902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303321771290492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |