Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq65 134 1e-26
seq103 111 1e-19
seq94 100 2e-16
seq93 98.7 8e-16
seq4 98.7 8e-16
seq37 93.3 4e-14
seq165 91.5 1e-13
seq46 91.5 1e-13
seq159 89.7 4e-13
seq73 87.8 2e-12
seq48 87.8 2e-12
seq140 84.2 2e-11
seq75 84.2 2e-11
seq26 84.2 2e-11
seq134 82.4 6e-11
>seq65
Length=13810318
Score = 134 bits (148), Expect = 1e-26
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||| || ||||| || || | || | || || |||||||||| || ||| |||
Sbjct 5575444 AGATGCGGATCTTTGTGAAGACCCTGACGAGCAAGACCATCACTCTTGAGGTTGAACCCA 5575385
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
||||| | || || ||||| ||||| || |||||||| ||||| ||||| ||||
Sbjct 5575384 GTGATACTATCGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGTATCCCACCAGATC 5575325
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
||||||||| || ||||| || |||||| |||| ||| ||| || |||||| ||||
Sbjct 5575324 AACAACGTCCGATTTTTGCTGGAAAACAGCTAGAAGATGGCCGAACTTCCTCCGACTACA 5575265
Query 22397 ACATTCAAAAAGAATCCAC 22415
|||| || ||||| |||||
Sbjct 5575264 ACATCCAGAAAGAGTCCAC 5575246
>seq103
Length=10584223
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || || || || || || |||| || |||||||| |||
Sbjct 9901278 GATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTGGAAGTGGAGCCCAG 9901337
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || || ||||| | || |||||||| || || || || ||||| ||
Sbjct 9901338 TGACACCATTGAGAATGTCAAA----AGATCCAAGACAAAGAAGGCATCCCCCCCGACCA 9901393
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || |||||||| || ||| | || ||| |||||| | || || |||||
Sbjct 9901394 GCAGAGGTTGATCTTTGCCGGGAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 9901453
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||| || ||||||||||| | || || || |||| ||| | ||||||
Sbjct 9901454 CATCCAGAAAGAATCCACTCTGCACTTGGTCCTGCGCTTGAGGGGAGGT 9901502
>seq94
Length=10919598
Score = 100 bits (110), Expect = 2e-16
Identities = 154/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 22212 TGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271
||| | |||||| |||||||| | ||||| | || || || |||| ||||| || ||
Sbjct 5504687 TGTCACGATGCAGATTTTTGTGAGGACTTTGATGGGGAAGACCATCACACTTGAGGTCGA 5504746
Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331
| || | ||||| | || || |||| || || ||||| |||| |||||||| |
Sbjct 5504747 ACCCTCTGATACTATTGAAAATGTCAAGGCCAAGATACAAGATCAGGAAGGTATTCCCTC 5504806
Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391
||||||||| | | || ||||| ||||| || | || ||| || || | || ||
Sbjct 5504807 TGATCAACAAAGATTGATTTTTGCGGGCAAGCAACTGGAAGATGGTCGAACTTTGTCTGA 5504866
Query 22392 TTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
||||||||||| || || || ||| | ||| | ||| ||
Sbjct 5504867 CTACAACATTCAGAAGGAGTCTACCCTTCATCTTGTTCTG 5504906
>seq93
Length=11044861
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| |||||||| || ||||| || || | || |||| ||||| || ||| | |
Sbjct 4041489 GATGCAGATTTTTGTGAAGACTTTGACAGGGGAGACTATCACGCTTGAGGTCGAACCGTC 4041548
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | || || |||| || || ||||| ||||| |||||||| || |||||
Sbjct 4041549 TGATACTATTGAAAATGTCAAGGCCAAGATACAAGATAAGGAAGGTATTCCCCCTGATCA 4041608
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|||| | || |||| ||||| || | || ||| || | | || || |||||
Sbjct 4041609 ACAAAAATTGATTTTTGTGGGCAAGCAACTGGAAGATGGTCGAATTTTGTCTGACTACAA 4041668
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
|||||| || ||||| ||| | ||| | ||| ||
Sbjct 4041669 CATTCAGAAGGAATCTACCCTTCATCTTGTTCTG 4041702
>seq4
Length=36543856
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| ||||| || || ||||| || | || || || ||||| || ||| | |
Sbjct 27117860 GATGCAGATTTTCGTGAAGACTTTCACAGAGAAGACCACCATGCTTGAGGTTGAACCATC 27117919
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|||||| | || || |||| || || ||||| ||||| || ||||| || |||||
Sbjct 27117920 TGATACCATTGAAAATGTCAAGGCCAAGATACAAGATAAGGAAGGAATTCCCCCTGATCA 27117979
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|||| | | || ||||| ||||| || | || ||| || || | || || |||||
Sbjct 27117980 ACAAAGATTGATTTTTGCGGGCAAGCAACTGGAAGATGGTCGAACTTTGTCTGACTACAA 27118039
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
|||||| || ||||| ||| | ||| | ||| ||
Sbjct 27118040 CATTCAGAAGGAATCTACCCTCCATCTTGTTCTG 27118073
>seq37
Length=18181243
Score = 93.3 bits (102), Expect = 4e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| ||||| | || ||||| || || || || | || ||||| || ||| |
Sbjct 5582605 GATGCAGATTTTCATGAAGACTTTGACAGGGAAGACCATTACGCTTGAGGTCGAACTGTC 5582664
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | || || |||| || || ||||| ||||| |||||||| || |||||
Sbjct 5582665 TGATACTATTGAAAATGTCAAGGCCAAGATACAAGATAAGGAAGGTATTCCCCCTGATCA 5582724
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|||| | | || ||||| ||||| || | || ||| || || | || || |||||
Sbjct 5582725 ACAAAGATTGATTTTTGCGGGCAAGCAACTGGAAGATGGTCGAACTTTGTCTGACTACAA 5582784
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTT 22428
|||||| || || || ||| | ||| | |||
Sbjct 5582785 CATTCAGAAGGAGTCTACCCTTCATCTTGTT 5582815
>seq165
Length=7268927
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| || ||||| | || || || ||| ||||| || |||||| |
Sbjct 1007436 ATGCAGATTTTTGTGAAGACTTTGATGGGGAAGACCATCATCCTTGAGGTC-AAACCATC 1007494
Query 22279 -GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | || || |||| || | ||||| ||||| |||||||| || |||||
Sbjct 1007495 AGATACTATTGAAAATGTCAAGGCCAAGACACAAGATAAGGAAGGTATTCCCCCTGATCA 1007554
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|||| | | || ||||| | ||| || | || ||| | || | || || |||||
Sbjct 1007555 ACAAGGATTGATTTTTGCGGACAAGCAACTGGAAGATGGTCAAACTTTGTCTGACTACAA 1007614
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
|||||| ||||| || ||| | ||| | ||| ||
Sbjct 1007615 CATTCAGAAAGAGTCTACCCTTCATCTTGTTCTG 1007648
>seq46
Length=16939101
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||||| ||||| || || |||||||||| || ||| | |
Sbjct 5708280 ATGCAGATTTTCGTGAAGACTTTGACCGGGAAGACCATCACTCTTGAGGTCGAACCATCT 5708339
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || || || |||| || | ||||| ||||| |||| ||| || ||||||
Sbjct 5708340 GACACTACTGAAAATGTCAAGGCCAAGGTACAAGATAAGGATGGTACTCCCCCTGATCAA 5708399
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| ||||| || | || ||| || || | || || ||||||
Sbjct 5708400 CAAAGATTGATTTTTGCAGGCAAGCAACTGGAAGATGGTCGAACTTTGTCTGACTACAAC 5708459
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
||||| || || || || | ||| | ||| ||
Sbjct 5708460 ATTCAGAAGGAGTCTACACTTCATCTTGTTCTG 5708492
>seq159
Length=7530659
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| ||||| || || |||| || || || || ||| ||||| || ||| | |
Sbjct 4974565 GATGCAGATTTTCGTGAAGACTTGGACGGGGAAGACCATCATGCTTGAGGTCGAACCGTC 4974624
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | || || |||| || || ||| | ||||| |||||||| || ||||
Sbjct 4974625 TGATACTATTGAAAATGTCAAGGCCAAGATACAAAATAAGGAAGGTATTCCCCCTCATCA 4974684
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|||| | | || |||||| |||| || | || ||| || || | || || |||||
Sbjct 4974685 ACAAAGATTGATTTTTGCCAGCAAGCAACTGGAAGATGGTCGAACTTTGTCTGACTACAA 4974744
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
|||||| || || || ||| | ||| | ||| ||
Sbjct 4974745 CATTCAGAAGGAGTCTACCCTTCATCTTGTTCTG 4974778
>seq73
Length=13007589
Score = 87.8 bits (96), Expect = 2e-12
Identities = 152/220 (69%), Gaps = 6/220 (3%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA-----A 22272
|||||| ||||| || || ||||| | || || || |||| ||||| | || |
Sbjct 8615759 GATGCAGATTTTCGTGAAGACTTTGATGGGGAAGACCATCACGCTTGAGCTTGAGGTCGA 8615700
Query 22273 ACCACC-GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331
|||| | ||||| | | || |||| || || ||||| || || |||||||| ||
Sbjct 8615699 ACCATCTGATACTATTGCAAATGTCAAGGCCAAGATACAAGATAAAGAAGGTATTCCCCC 8615640
Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391
||||||||| | | || ||||| ||||| || | || ||| || || | || ||
Sbjct 8615639 TGATCAACAAAGATTGATTTTTGCGGGCAAGCAACTGGAAGATGGTCGAACTTTGTCTGA 8615580
Query 22392 TTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
||||||||||| || ||||| ||| | ||| | ||| ||
Sbjct 8615579 CTACAACATTCAGAAGGAATCTACCCTTCATCTTGTTCTG 8615540
>seq48
Length=16487017
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/215 (70%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| ||||| || || ||||| | || || || |||| ||||| || ||||||
Sbjct 8366675 GATGCAGATTTTCGTGAAGACTTTGATGGGGAAGACCATCACCCTTGAGGTC-AAACCAT 8366733
Query 22278 C-GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| ||||| | || || |||| || || ||||| ||||| |||||||| || ||||
Sbjct 8366734 CTGATACTATTGAAAATGTCAAGGCCAAGATACAAGATAAGGAAGGTATTCCCCCTGATC 8366793
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
||||| | | || |||| ||||| || | || | | | || | || || ||||
Sbjct 8366794 AACAAAGATTGATTTTTGTGGGCAAGCAACTGGAAGGTGGTCAAACTTTGTCTGACTACA 8366853
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
||||||| || || || ||| | ||| | ||| ||
Sbjct 8366854 ACATTCAGAAGGAGTCTACCCTTCATCTTGTTCTG 8366888
>seq140
Length=8386802
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| ||||| | || ||||| | || || || |||| ||||| || ||| | |
Sbjct 635478 GATGCAGATTTTCATGAAGACTTTGATGGGGAAGACCATCACGCTTGAGGTCGAACCGTC 635419
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | | || |||| || || ||||| ||||| |||||||| || |||||
Sbjct 635418 TGATACTATTGCAAATGTCAAGGCCAAGATACAAGATAAGGAAGGTATTCCCCCTGATCA 635359
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|||| | | || |||| ||||| || | || || | || | || || |||||
Sbjct 635358 ACAAAGATTGATTTTTGTGGGCAAGCAACTGGAAAATGGTTGAACTTTGTCTGACTACAA 635299
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
|||||| || ||||| ||| | ||| | ||| ||
Sbjct 635298 CATTCAGAAGGAATCTACCCTTCATCTTGTTCTG 635265
>seq75
Length=12821919
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| |||||||| | ||||| || || || || ||| ||||| || ||| | |
Sbjct 2199967 GATGCAGATTTTTGTGGAGACTTTGACAGGGAAGACCATCATGCTTGAGGTTGAACCGTC 2199908
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||| | || || |||| || || ||||| ||||| |||||||| || |||||
Sbjct 2199907 TAATATTATTGAAAATGTCAAGGCCAAGATACAAGATAAGGAAGGTATTCCCCCTGATCA 2199848
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|||| | | || ||||| | || || | || |||| || || | || || |||||
Sbjct 2199847 ACAAAGATTGATTTTTGCGAGTAAGCAACTGGAAGATCGTCGAACTTTGTCTGACTACAA 2199788
Query 22398 CATTCAAAAAGAATCCACC 22416
|||||| || || || |||
Sbjct 2199787 CATTCAGAAGGAGTCTACC 2199769
>seq26
Length=21800395
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| ||||| | || ||||| || || || || ||| ||||| || ||| |
Sbjct 5591895 GATGCAGATTTTCTTGAAGACTTTGACGGGGAAGACCATCATGCTTGAGGTAGAACAGTC 5591836
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | || || |||| || || ||||| ||||| |||||||| || |||||
Sbjct 5591835 TGATACTATTGAAAATGTCAAGGTCAAGATACAAGATAAGGAAGGTATTCCCCCTGATCA 5591776
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|||| | | || ||||| ||||| || | || ||| | || | | || |||||
Sbjct 5591775 ACAAAGATTGATTTTTGCAGGCAAGCAACTGGAAGATGGTTGAACTTTGACTGACTACAA 5591716
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
|||||| || || || ||| | ||| | ||| ||
Sbjct 5591715 CATTCAGAAGGAGTCTACCCTTCATCTTGTTCTG 5591682
>seq134
Length=8699209
Score = 82.4 bits (90), Expect = 6e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 22321 GGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGC 22380
||||| ||||| |||||||||||||| || ||||| || |||||| |||| ||| |||
Sbjct 5518426 GGTATCCCACCAGATCAACAACGTCTGATTTTTGCTGGAAAACAGCTAGAAGATGGCCGA 5518367
Query 22381 ACCGTCTCCGATTACAACATTCAAAAAG 22408
|| ||||||| ||||| || || ||||
Sbjct 5518366 ACTCTCTCCGACTACAATATCCAGAAAG 5518339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419718249980890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |