Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq85 95.1 1e-14
seq118 84.2 2e-11
>seq85
Length=11587828
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||||| |||| || |||||||| || ||| |||| ||| | || || |
Sbjct 256587 CGCAGCACCAAGTGTAGAGTGGACTCTTTCTGGATAATGTAGTCGGAGAGAGTTCGGCCA 256528
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| ||||||||||||||||| | |||| || | |||||| || || || || |||||
Sbjct 256527 TCTTCTAGCTGTTTTCCAGCAAAAATCAGACGTTACTGATCTGGTGGGATACCTTCCTTT 256468
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| |||||| |||| | |||| || || | || || || | || |
Sbjct 256467 TCCTGGATTTTGGCTTTGACATTCTCGATAGTATCACTGGGTTCAACCTCAAGAGTGATA 256408
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| ||||| ||||| || || ||||| ||||||||
Sbjct 256407 GTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 256373
>seq118
Length=9585089
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || ||||| || || || ||||| || || || | |
Sbjct 4426947 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCA 4426888
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || || |||| | | |||||| || || || ||||||||||||
Sbjct 4426887 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTG 4426828
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | |||| ||||| | ||| || || | ||| |
Sbjct 4426827 TCCTGGATCTTGGCCTTGACATTCTCGATAGTGTCACTGGGCTCCACCTCCAAGGTGATG 4426768
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| ||||| || || ||||| |||||||||
Sbjct 4426767 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 4426732
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || ||||| || || || ||||| || || || | |
Sbjct 4427857 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCA 4427798
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || || |||| | | |||||| || || || ||||||||||||
Sbjct 4427797 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTG 4427738
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | |||| ||||| | ||| || || | ||| |
Sbjct 4427737 TCCTGGATCTTGGCCTTGACATTCTCGATAGTGTCACTGGGCTCCACCTCCAAGGTGATG 4427678
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| ||||| || || ||||| |||||||||
Sbjct 4427677 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 4427642
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || ||||| || || || ||||| || || || | |
Sbjct 4428768 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCA 4428709
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || || |||| | | |||||| || || || ||||||||||||
Sbjct 4428708 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTG 4428649
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | |||| ||||| | ||| || || | ||| |
Sbjct 4428648 TCCTGGATCTTGGCCTTGACATTCTCGATAGTGTCACTGGGCTCCACCTCCAAGGTGATG 4428589
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| ||||| || || ||||| |||||||||
Sbjct 4428588 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 4428553
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || ||||| || || || ||||| || || || | |
Sbjct 4428996 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCA 4428937
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || || |||| | | |||||| || || || ||||||||||||
Sbjct 4428936 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTG 4428877
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | |||| ||||| | ||| || || | ||| |
Sbjct 4428876 TCCTGGATCTTGGCCTTGACATTCTCGATAGTGTCACTGGGCTCCACCTCCAAGGTGATG 4428817
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| ||||| || || ||||| |||||||||
Sbjct 4428816 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 4428781
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || ||||| || || || ||||| || || || | |
Sbjct 4429905 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCA 4429846
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || || |||| | | |||||| || || || ||||||||||||
Sbjct 4429845 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTG 4429786
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | |||| ||||| | ||| || || | ||| |
Sbjct 4429785 TCCTGGATCTTGGCCTTGACATTCTCGATAGTGTCACTGGGCTCCACCTCCAAGGTGATG 4429726
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| ||||| || || ||||| |||||||||
Sbjct 4429725 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 4429690
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || ||||| || || || ||||| || || || | |
Sbjct 4430359 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTGCCA 4430300
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || || |||| | | |||||| || || || ||||||||||||
Sbjct 4430299 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTG 4430240
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | |||| ||||| | ||| || || | ||| |
Sbjct 4430239 TCCTGGATCTTGGCCTTGACATTCTCGATAGTGTCACTGGGCTCCACCTCCAAGGTGATG 4430180
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| ||||| || || ||||| |||||||||
Sbjct 4430179 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 4430144
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || ||||| || || || ||||| || || || | |
Sbjct 4426493 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCA 4426434
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || || |||| | | |||||| || || || ||||||||||||
Sbjct 4426433 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTG 4426374
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | |||| ||||| | ||| || || | ||| |
Sbjct 4426373 TCCTGGATCTTGGCCTTGACATTCTCGATAGTGTCACTGGGCTCCACCTCCAAGGTGATG 4426314
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| ||||| ||||| || || ||||| ||||||||
Sbjct 4426313 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 4426279
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| || || || | ||| || ||||| || ||
Sbjct 4428067 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCATCTTCCAGCTGCTTGCCT 4428008
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | | |||||| || || || ||||||||||||||| ||| || ||||
Sbjct 4428007 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 4427948
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||||| | ||| || || | ||| | || ||||| ||||| ||
Sbjct 4427947 ACATTCTCGATAGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTC 4427888
Query 127097 TTTACAAAAATCTGCATG 127114
|| ||||| |||||||||
Sbjct 4427887 TTCACAAAGATCTGCATG 4427870
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| || || || | ||| || ||||| || ||
Sbjct 4429659 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCATCTTCCAGCTGCTTGCCT 4429600
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | | |||||| || || || ||||||||||||||| ||| || ||||
Sbjct 4429599 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 4429540
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||||| | ||| || || | ||| | || ||||| ||||| ||
Sbjct 4429539 ACATTCTCGATAGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCTGTCAGGGTC 4429480
Query 127097 TTTACAAAAATCTGCATG 127114
|| ||||| |||||||||
Sbjct 4429479 TTCACAAAGATCTGCATG 4429462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475489471193440
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