Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04- 18] 1,906 sequences; 3,192,565,135 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq179 96.9 2e-15 >seq179 Length=6459238 Score = 96.9 bits (106), Expect = 2e-15 Identities = 103/131 (79%), Gaps = 4/131 (3%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | |||||| ||||| | ||| |||| | ||| || |||| | ||||| || Sbjct 3630596 CATAAAGAGATCTGGGATCCAGAGGGCAAAAAAAAGATCCCTGGCTCGCTGCTCTTCCTT 3630655 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAAT-CAAAAATATCTGAGTGCCATGGTTCTAAA 26050 || ||| ||||| || ||||| ||||||| ||||||| ||| ||||||||||||| || Sbjct 3630656 CCCAGTG-TTCTTCTTCAGATC-AAGAAATTCAAAAATGTCTAAGTGCCATGGTTCCAAG 3630713 Query 26051 TAGATAGCAAA 26061 ||||| ||||| Sbjct 3630714 TAGATGGCAAA 3630724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253034122038950