Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq37 122 1e-22
seq94 102 1e-16
seq26 102 1e-16
seq140 98.7 1e-15
seq93 98.7 1e-15
seq73 98.7 1e-15
seq75 95.1 2e-14
seq159 93.3 6e-14
seq160 91.5 2e-13
seq23 91.5 2e-13
seq48 89.7 8e-13
seq46 89.7 8e-13
seq4 86.0 9e-12
seq60 84.2 3e-11
>seq37
Length=18181243
Score = 122 bits (134), Expect = 1e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || || || || ||||| || || || ||||| | || |||||| |||
Sbjct 5582606 ATGCAGATTTTCATGAAGACTTTGACAGGGAAGACCATTACGCTTGAGGTCGAACTGTCT 5582665
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| ||| || || || ||||||||||| ||||| || || || || |||
Sbjct 5582666 GATACTATTGAAAATGTCAAGGCCAAGATACAAGATAAGGAAGGTATTCCCCCTGATCAA 5582725
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||| || ||||| || |||||| ||||||| || || || ||
Sbjct 5582726 CAAAGATTGATTTTTGCGGGCAAGCAACTGGAAGATGGTCGAACTTTGTCTGACTACAAC 5582785
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAG 156037
|| || ||| | || |||||| | || ||||
Sbjct 5582786 ATTCAGAAGGAGTCTACCCTTCATCTTGTTCTAAG 5582820
>seq94
Length=10919598
Score = 102 bits (112), Expect = 1e-16
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | | || |||| || || || || ||| | || |||||| |||
Sbjct 5504694 ATGCAGATTTTTGTGAGGACTTTGATGGGGAAGACCATCACACTTGAGGTCGAACCCTCT 5504753
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| ||| || || || ||||||||| | ||||| || || | || |||
Sbjct 5504754 GATACTATTGAAAATGTCAAGGCCAAGATACAAGATCAGGAAGGTATTCCCTCTGATCAA 5504813
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||| || ||||| || |||||| ||||||| || || || ||
Sbjct 5504814 CAAAGATTGATTTTTGCGGGCAAGCAACTGGAAGATGGTCGAACTTTGTCTGACTACAAC 5504873
Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026
|| || ||| | || ||||||
Sbjct 5504874 ATTCAGAAGGAGTCTACCCTTCAT 5504897
>seq26
Length=21800395
Score = 102 bits (112), Expect = 1e-16
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || ||||| || || || || | | || || ||| | |||
Sbjct 5591894 ATGCAGATTTTCTTGAAGACTTTGACGGGGAAGACCATCATGCTTGAGGTAGAACAGTCT 5591835
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| ||| || || || ||||||||||| ||||| || || || || |||
Sbjct 5591834 GATACTATTGAAAATGTCAAGGTCAAGATACAAGATAAGGAAGGTATTCCCCCTGATCAA 5591775
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||| || ||||| || |||||| ||||||| | || || ||
Sbjct 5591774 CAAAGATTGATTTTTGCAGGCAAGCAACTGGAAGATGGTTGAACTTTGACTGACTACAAC 5591715
Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026
|| || ||| | || ||||||
Sbjct 5591714 ATTCAGAAGGAGTCTACCCTTCAT 5591691
>seq140
Length=8386802
Score = 98.7 bits (108), Expect = 1e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || || || || |||| || || || || || | || |||||| |||
Sbjct 635477 ATGCAGATTTTCATGAAGACTTTGATGGGGAAGACCATCACGCTTGAGGTCGAACCGTCT 635418
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| ||| || || || ||||||||||| ||||| || || || || |||
Sbjct 635417 GATACTATTGCAAATGTCAAGGCCAAGATACAAGATAAGGAAGGTATTCCCCCTGATCAA 635358
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| || || ||||| || ||| || ||||||| || || || ||
Sbjct 635357 CAAAGATTGATTTTTGTGGGCAAGCAACTGGAAAATGGTTGAACTTTGTCTGACTACAAC 635298
Query 156003 AT 156004
||
Sbjct 635297 AT 635296
>seq93
Length=11044861
Score = 98.7 bits (108), Expect = 1e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || ||||| || | ||||| || | || |||||| |||
Sbjct 4041490 ATGCAGATTTTTGTGAAGACTTTGACAGGGGAGACTATCACGCTTGAGGTCGAACCGTCT 4041549
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| ||| || || || ||||||||||| ||||| || || || || |||
Sbjct 4041550 GATACTATTGAAAATGTCAAGGCCAAGATACAAGATAAGGAAGGTATTCCCCCTGATCAA 4041609
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||| |||||||| || || ||||| || |||||| ||| ||| || || || ||
Sbjct 4041610 CAAAAATTGATTTTTGTGGGCAAGCAACTGGAAGATGGTCGAATTTTGTCTGACTACAAC 4041669
Query 156003 AT 156004
||
Sbjct 4041670 AT 4041671
>seq73
Length=13007589
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 155868 GAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGC 155927
|| |||||| ||||||| |||| ||| || || || |||||||||||||||||
Sbjct 8615707 GAGGTCGAACCATCTGATACTATTGCAAATGTCAAGGCCAAGATACAAGATAAAGAAGGT 8615648
Query 155928 ATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACT 155987
|| || || || |||||||||||||||| ||| || ||||| || |||||| |||||
Sbjct 8615647 ATTCCCCCTGATCAACAAAGATTGATTTTTGCGGGCAAGCAACTGGAAGATGGTCGAACT 8615588
Query 155988 TTATCAGATTATAATAT 156004
|| || || || || ||
Sbjct 8615587 TTGTCTGACTACAACAT 8615571
>seq75
Length=12821919
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | | || ||||| || || || || | | || || ||| |||
Sbjct 2199966 ATGCAGATTTTTGTGGAGACTTTGACAGGGAAGACCATCATGCTTGAGGTTGAACCGTCT 2199907
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
||| |||| ||| || || || ||||||||||| ||||| || || || || |||
Sbjct 2199906 AATATTATTGAAAATGTCAAGGCCAAGATACAAGATAAGGAAGGTATTCCCCCTGATCAA 2199847
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||| ||||||| || |||||| ||||||| || || || ||
Sbjct 2199846 CAAAGATTGATTTTTGCGAGTAAGCAACTGGAAGATCGTCGAACTTTGTCTGACTACAAC 2199787
Query 156003 AT 156004
||
Sbjct 2199786 AT 2199785
>seq159
Length=7530659
Score = 93.3 bits (102), Expect = 6e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || | ||| || || || || | | || |||||| |||
Sbjct 4974566 ATGCAGATTTTCGTGAAGACTTGGACGGGGAAGACCATCATGCTTGAGGTCGAACCGTCT 4974625
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| ||| || || || |||||| |||| ||||| || || || | |||
Sbjct 4974626 GATACTATTGAAAATGTCAAGGCCAAGATACAAAATAAGGAAGGTATTCCCCCTCATCAA 4974685
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| |||| | ||||| || |||||| ||||||| || || || ||
Sbjct 4974686 CAAAGATTGATTTTTGCCAGCAAGCAACTGGAAGATGGTCGAACTTTGTCTGACTACAAC 4974745
Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026
|| || ||| | || ||||||
Sbjct 4974746 ATTCAGAAGGAGTCTACCCTTCAT 4974769
>seq160
Length=7493426
Score = 91.5 bits (100), Expect = 2e-13
Identities = 129/180 (72%), Gaps = 1/180 (1%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
|||| | || ||| | || || ||||| || || || || || | || ||||| ||
Sbjct 3645962 AATGTAGATTTTTGTGAAGACTTTGACAGGGAAGACCATCACCCTCGAGATCGAACCGTC 3645903
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| |||| |||||||||| || ||||||||||| ||||| || || || || ||
Sbjct 3645902 CCATACTATTGAAAACGTGAAAGCCAAGATACAAGATAAGGAAGGTATTCC-CCTGATCA 3645844
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||||||||||| ||| || || || |||| | |||||||||| || || ||
Sbjct 3645843 ACAAAGATTGATTTTTGCAGGCGGTCAACTGGAAGGTGGTTGAACTTTATCTGACTACAA 3645784
>seq23
Length=22081990
Score = 91.5 bits (100), Expect = 2e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || ||||| || || || || || | || |||||| ||
Sbjct 21845320 ATGCAGATTTTTGTGAAGACTTTGACAGGGAAGACCATCACCCTTGAGGTCGAACCATCC 21845261
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
||| |||| ||| || || || ||||||||||| |||| || || || || |||
Sbjct 21845260 AATACTATTGAAAATGTCAAGGCCAAGATACAAGATAAGAAAGGTATTCCCCCTGATCAA 21845201
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||| | ||||| | ||||| ||||||| || || |||||
Sbjct 21845200 CAAAGATTGATTTTTGCGGACAAGCAATTGAAAGATGGATGAACTTTGTCTGACTATAAC 21845141
Query 156003 ATATCCAAAGAGGCGACGCTTCA 156025
|| || ||| | || |||||
Sbjct 21845140 ATTCAGAAGGAGTCTACCCTTCA 21845118
>seq48
Length=16487017
Score = 89.7 bits (98), Expect = 8e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || |||| || || || || || | || ||| || |||
Sbjct 8366676 ATGCAGATTTTCGTGAAGACTTTGATGGGGAAGACCATCACCCTTGAGGTCAAACCATCT 8366735
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| ||| || || || ||||||||||| ||||| || || || || |||
Sbjct 8366736 GATACTATTGAAAATGTCAAGGCCAAGATACAAGATAAGGAAGGTATTCCCCCTGATCAA 8366795
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| || || ||||| || |||| | |||||| || || || ||
Sbjct 8366796 CAAAGATTGATTTTTGTGGGCAAGCAACTGGAAGGTGGTCAAACTTTGTCTGACTACAAC 8366855
Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026
|| || ||| | || ||||||
Sbjct 8366856 ATTCAGAAGGAGTCTACCCTTCAT 8366879
>seq46
Length=16939101
Score = 89.7 bits (98), Expect = 8e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || ||||| || || || || || | || |||||| |||
Sbjct 5708280 ATGCAGATTTTCGTGAAGACTTTGACCGGGAAGACCATCACTCTTGAGGTCGAACCATCT 5708339
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || | ||| || || || |||||||||| || || | || || || |||
Sbjct 5708340 GACACTACTGAAAATGTCAAGGCCAAGGTACAAGATAAGGATGGTACTCCCCCTGATCAA 5708399
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||| || ||||| || |||||| ||||||| || || || ||
Sbjct 5708400 CAAAGATTGATTTTTGCAGGCAAGCAACTGGAAGATGGTCGAACTTTGTCTGACTACAAC 5708459
Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026
|| || ||| | || ||||||
Sbjct 5708460 ATTCAGAAGGAGTCTACACTTCAT 5708483
>seq4
Length=36543856
Score = 86.0 bits (94), Expect = 9e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||||| ||| ||| || || || ||||||||||| ||||| || || || ||
Sbjct 27117918 TCTGATACCATTGAAAATGTCAAGGCCAAGATACAAGATAAGGAAGGAATTCCCCCTGAT 27117977
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||||| ||| || ||||| || |||||| ||||||| || || ||
Sbjct 27117978 CAACAAAGATTGATTTTTGCGGGCAAGCAACTGGAAGATGGTCGAACTTTGTCTGACTAC 27118037
Query 156000 AATAT 156004
|| ||
Sbjct 27118038 AACAT 27118042
>seq60
Length=14251744
Score = 84.2 bits (92), Expect = 3e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || || || || ||||| || || || || || | || ||| || ||
Sbjct 8688551 ATGCAGATTTTCATGAATACTTTGACAGGGAAGACCATCACCCTTGAGGTCAAACTGTCC 8688610
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
||| |||| ||| || || | ||||||||||||||||| || || | || ||
Sbjct 8688611 TATACTATTGAAAATGTCAAGGCCAGGATACAAGATAAAGAAGGTATTCCCCTTGATCAG 8688670
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||||||||||||| || || ||||| || |||||| ||||||| || || || ||
Sbjct 8688671 CAAAGATTGATTTTTGTGGGCAAGCAACTGGAAGATGGATGAACTTTGTCTGACTACAA 8688729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731854563149600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |