Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04- 18] 1,906 sequences; 3,192,565,135 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq168 86.0 2e-11 >seq168 Length=7028291 Score = 86.0 bits (94), Expect = 2e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 ||||||| || ||| || ||||| || ||||| || || |||| |||||||||||||| Sbjct 5745855 ACCAGTTTCAGCTGTCTTGACAGCAGTGTCAATAAGCCCTTCACGCCCACCCATAGCATG 5745914 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 |||||| | ||| ||| || || | | | ||| |||| || || || || Sbjct 5745915 GAAGAAGAACTCAGTGGGTGTGAGACCAGCCAAGTATGAGTTCTCCACAAAGCCTCGGCT 5745974 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||| || || || ||| | ||||| || ||||||| || | |||| | || Sbjct 5745975 CTCAGGACCATAATCATCTTTGATGAAGTGGGGAAGGGTCCGGTGTTTGAAGCCAAAGGG 5746034 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCC 302816 || ||||| || || |||||||||||||| Sbjct 5746035 AATCCGCTTGCCTTCTACGTTCTGCTGTCC 5746064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471781657294322