Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq5 224 2e-52
seq701 219 7e-51
seq168 215 8e-50
>seq5
Length=36077823
Score = 224 bits (248), Expect = 2e-52
Identities = 196/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 31707158 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 31707099
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| |||| ||| ||| ||||||||| |
Sbjct 31707098 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGAAGTGATGGTGGAGCGCTTGTTGTAGT 31707039
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 31707038 GCGCCAGGCGGGAAGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 31706979
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||||| ||||||||| |||||||| ||||| ||||
Sbjct 31706978 TGATGCCCATGGCCTTGGAGGAGATGCCCGTGTCGGGGTGGACCTGCTTCAGCACTTTGT 31706919
Query 1485710 AAAC 1485713
| ||
Sbjct 31706918 AGAC 31706915
Score = 215 bits (238), Expect = 8e-50
Identities = 194/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 31741412 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 31741353
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | ||| || ||||||||| |
Sbjct 31741352 GCAGCAGACGCACGGCCGTCTGGATCTCCCGAGAAGTGATGGTCGAGCGCTTGTTGTAGT 31741293
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| |||||| || | ||||| |||| ||||||||||| || |||||||
Sbjct 31741292 GCGCCAGGCGGGAAGCCTCGCTGGCTATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 31741233
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||||| ||||||||| |||||||| ||||||||||
Sbjct 31741232 TGATGCCCATGGCCTTGGAGGAGATGCCCGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 31741173
Query 1485710 AAAC 1485713
| ||
Sbjct 31741172 AGAC 31741169
Score = 208 bits (230), Expect = 1e-47
Identities = 194/245 (79%), Gaps = 1/245 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCC-GCGC 1485528
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || || | ||
Sbjct 31738991 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCCGGGC 31739050
Query 1485529 ATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTG 1485588
| | |||||||||||| ||||||||||| |||| ||| || ||||||||| |
Sbjct 31739051 AGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGAAGTGATGGTCGAGCGCTTGTTGTAG 31739110
Query 1485589 CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
||||||||||| |||||| | ||||||| |||| ||||||||||| || || |||
Sbjct 31739111 TGCGCCAGGCGGGAAGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAATTC 31739170
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||| | ||| |||||||||| ||||||||| |||||||| ||||| |||
Sbjct 31739171 ATGATGCCCATGGCCTTGGAGGAGATGCCCGTGTCGGGGTGGACCTGCTTCAGCACTTTG 31739230
Query 1485709 TAAAC 1485713
|| ||
Sbjct 31739231 TAGAC 31739235
Score = 203 bits (224), Expect = 5e-46
Identities = 194/244 (80%), Gaps = 6/244 (2%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| | ||| |||
Sbjct 31720548 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAG--CCCCGGGCA 31720605
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| |||| ||| ||| ||| |||| |||||
Sbjct 31720606 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGAAGTGATGGTGGAGCGTTTGT-AGTGC 31720664
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|| ||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 31720665 GC--CAGGCGGGAAGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 31720722
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||||| ||| ||||| |||||||| ||||| ||||
Sbjct 31720723 TGATGCCCATAGCCTTGGAGGAGATGCCCGTGTC-GGGTGGACCTGCTTCAGCACTTTGT 31720781
Query 1485710 AAAC 1485713
| ||
Sbjct 31720782 AGAC 31720785
>seq701
Length=45252
Score = 219 bits (242), Expect = 7e-51
Identities = 195/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| |||||||||| ||| |||
Sbjct 3419 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGTTCCCCGGGCA 3360
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| |||| ||| ||| |||||||||
Sbjct 3359 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTGGAGCGCTTGTTGTAAT 3300
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| |||||| | |||| || |||| ||||||||||| || |||||||
Sbjct 3299 GCGCCAGGCGGGACGCCTCGCCGGCGATCCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 3240
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | |||| ||||||||| ||| ||||| |||||||| ||||||||||
Sbjct 3239 TGATGCCCATGGCTTTGGAGGAGATGCCAGTGTCAGGGTGGACCTGCTTCAGCACCTTGT 3180
Query 1485710 AAAC 1485713
| ||
Sbjct 3179 ACAC 3176
Score = 219 bits (242), Expect = 7e-51
Identities = 195/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| |||||||||| ||| |||
Sbjct 23304 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGTTCCCCGGGCA 23363
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| |||| ||| ||| |||||||||
Sbjct 23364 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTGGAGCGCTTGTTGTAAT 23423
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| |||||| | |||| || |||| ||||||||||| || |||||||
Sbjct 23424 GCGCCAGGCGGGACGCCTCGCCGGCGATCCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 23483
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | |||| ||||||||| ||| ||||| |||||||| ||||||||||
Sbjct 23484 TGATGCCCATGGCTTTGGAGGAGATGCCAGTGTCAGGGTGGACCTGCTTCAGCACCTTGT 23543
Query 1485710 AAAC 1485713
| ||
Sbjct 23544 ACAC 23547
>seq168
Length=7028291
Score = 215 bits (238), Expect = 8e-50
Identities = 194/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 2258733 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 2258674
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| |||| ||| ||| |||||||||
Sbjct 2258673 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTGGAGCGCTTGTTGTAAT 2258614
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| ||||| | |||| || |||| ||||||||||| || |||||||
Sbjct 2258613 GCGCCAGGCGGGACGCCTCTCCGGCGATCCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 2258554
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||||| ||||||||| |||||||| ||||||||||
Sbjct 2258553 TGATGCCCATGGCCTTGGAGGAGATGCCCGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 2258494
Query 1485710 AAAC 1485713
| ||
Sbjct 2258493 ACAC 2258490
Score = 215 bits (238), Expect = 8e-50
Identities = 194/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 2297801 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 2297742
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| |||| ||| ||| |||||||||
Sbjct 2297741 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTGGAGCGCTTGTTGTAAT 2297682
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| ||||| | |||| || |||| ||||||||||| || |||||||
Sbjct 2297681 GCGCCAGGCGGGACGCCTCTCCGGCGATCCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 2297622
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||||| ||||||||| |||||||| ||||||||||
Sbjct 2297621 TGATGCCCATGGCCTTGGAGGAGATGCCCGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 2297562
Query 1485710 AAAC 1485713
| ||
Sbjct 2297561 ACAC 2297558
Score = 215 bits (238), Expect = 8e-50
Identities = 194/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 2310965 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 2311024
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| |||| ||| ||| |||||||||
Sbjct 2311025 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTGGAGCGCTTGTTGTAAT 2311084
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| ||||| | |||| || |||| ||||||||||| || |||||||
Sbjct 2311085 GCGCCAGGCGGGACGCCTCTCCGGCGATCCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 2311144
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||||| ||||||||| |||||||| ||||||||||
Sbjct 2311145 TGATGCCCATGGCCTTGGAGGAGATGCCCGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 2311204
Query 1485710 AAAC 1485713
| ||
Sbjct 2311205 ACAC 2311208
Score = 208 bits (230), Expect = 1e-47
Identities = 193/244 (79%), Gaps = 3/244 (1%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||||||||| || ||||||||| ||||||| || ||| |||
Sbjct 2441423 TGTACTTGGTGACGGCCTTGGTACCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 2441482
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|||||||||||| ||||||||||| |||| ||| ||| |||||||||
Sbjct 2441483 G---CAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTGGAGCGCTTGTTGTAAT 2441539
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| || ||| | |||| || |||| ||||||||||| || |||||||
Sbjct 2441540 GCGCCAGGCGTGACGCTTCGCCGGCGATCCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 2441599
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||||| ||||||||| |||||||| ||||||||||
Sbjct 2441600 TGATGCCCATGGCCTTGGAGGAGATGCCCGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 2441659
Query 1485710 AAAC 1485713
| ||
Sbjct 2441660 ACAC 2441663
Score = 194 bits (214), Expect = 3e-43
Identities = 190/244 (78%), Gaps = 1/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||| ||||||||||||||||||||||| || ||||||||| |||| || || ||| |||
Sbjct 2508564 TGTATTTGGTGACGGCCTTGGTACCCTCGGACACGGCGTGCTTGGC-AGCTCCCCGGGCA 2508506
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||||| ||||||||||| |||| ||| ||| ||||||||
Sbjct 2508505 GCAGTAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTGGAACGCTTGTTGTAAT 2508446
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||| |||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 2508445 GCGCCAAGCGGGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 2508386
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||| |||||| |||||||| |||||||| ||||||||||
Sbjct 2508385 TGATGCCCATAGCCTTGGAGGAAATGCCCGTATCGGGGTGGACCTGCTTCAGCACCTTGT 2508326
Query 1485710 AAAC 1485713
| ||
Sbjct 2508325 ACAC 2508322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916043650086734
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