Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04- 18] 1,906 sequences; 3,192,565,135 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq36 86.0 8e-12 >seq36 Length=18184789 Score = 86.0 bits (94), Expect = 8e-12 Identities = 151/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 171622 TGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTTGG 171681 ||| ||||||| ||||| || || | || | | || | ||| || ||| | ||| Sbjct 7686453 TGGTTTATTAAGGGTTCCACAAATGCTAAGGAGCTCTCTGCCAAAGGAGTAAAAATCTGG 7686394 Query 171682 AATGATAATGGTTCTCGTGAATTTTTAGATTTATGC--GGGTTTACTGAAAGAAAAGAAG 171739 | | ||||| ||||| || ||||| || | || ||||| ||| ||| | |||| Sbjct 7686393 GACGCCAATGGATCTCGAGACTTTTTGGAC--AAGCAGGGGTTCACTACCAGAGAGGAAG 7686336 Query 171740 GTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGACT 171799 | ||||| || ||| | ||||| || || ||||||||| ||||| |||| | || Sbjct 7686335 GAGATTTGGGACCAGTGTATGGCTTCCAGTGGAGACATTTTGGGGCAGAATACAAAGAGA 7686276 Query 171800 GTTATACAGATTACACAGGACAAGGAGTGGACCAATTA 171837 |||||||||| | |||||||||||||| ||| || Sbjct 7686275 TGAATACAGATTATTCTGGACAAGGAGTGGATCAACTA 7686238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628516225244160