Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq85 111 1e-19
seq65 98.7 8e-16
>seq85
Length=11587828
Score = 111 bits (122), Expect = 1e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| ||||| |||| || || ||||| || ||| |||||||| | | || |
Sbjct 256587 CGCAGCACCAAGTGTAGAGTGGACTCTTTCTGGATAATGTAGTCGGAGAGAGTTCGGCCA 256528
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| |||||||| || || |||| ||||| | ||||| || || | ||| || ||
Sbjct 256527 TCTTCTAGCTGTTTTCCAGCAAAAATCAGACGTTACTGATCTGGTGGGATACCTTCCTTT 256468
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||| ||| ||| | | || | ||| || ||| |||||| || ||||| |||
Sbjct 256467 TCCTGGATTTTGGCTTTGACATTCTCGATAGTATCACTGGGTTCAACCTCAAGAGTGATA 256408
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
| ||||| ||||| || ||||||||||| ||||| ||||
Sbjct 256407 GTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 256367
>seq65
Length=13810318
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC-ATGTTGCGCTCGTCTTC 27097
||||| || | || || ||||| || || ||||||||| | ||| || | |||||
Sbjct 5575234 ACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAGGAAGTTCGGC-CATCTTC 5575292
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
|||||||| || || |||| |||| |||||||| || || | ||| || || ||
Sbjct 5575293 TAGCTGTTTTCCAGCAAAAATCGGACGTTGTTGATCTGGTGGGATACCTTCCTTGTCCTG 5575352
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
||| ||| ||| | | || | ||| || ||| |||||| || ||||| || | ||
Sbjct 5575353 GATTTTGGCTTTGACATTCTCGATAGTATCACTGGGTTCAACCTCAAGAGTGATGGTCTT 5575412
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
|| |||||| || ||||||||||| |||| ||||
Sbjct 5575413 GCTCGTCAGGGTCTTCACAAAGATCCGCATCTCTGC 5575448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424924529039472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |