Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq68 100 3e-16
>seq68
Length=13225171
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
|| ||||||||||| | ||| || | |||||||| || ||||| || ||||||||
Sbjct 1069493 GTAAAGATGTATCGAGGGCTAGCAGAGTCCTTGCCCCCATGCAGCCTGGTACCAAACTGA 1069434
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| ||||| | ||||||||| |||||| |||||| ||||| ||||||||||| | |
Sbjct 1069433 CCAATGGGCTGCAAGAGGTTGAGATTGTTGCTGCCCACAAAATTTTGAGCCAAATTAATA 1069374
Query 152149 ATCGT 152153
|| ||
Sbjct 1069373 ATGGT 1069369
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
|| || ||||| |||| ||| |||| |||||||| ||| || | ||||| || ||
Sbjct 1069493 GTAAAGATGTATCGAGGGCTAGCAGAGTCCTTGCCCCCATGCAGCCTGGTACCAAACTGA 1069434
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | |||| ||||||||| || |||||| ||||||||| ||||||||||| || | |
Sbjct 1069433 CCAATGGGCTGCAAGAGGTTGAGATTGTTGCTGCCCACAAAATTTTGAGCCAAATTAATA 1069374
Query 117425 ATCGT 117429
|| ||
Sbjct 1069373 ATGGT 1069369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547202962578800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |