Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04- 18] 1,906 sequences; 3,192,565,135 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq274 95.1 1e-14 >seq274 Length=3334443 Score = 95.1 bits (104), Expect = 1e-14 Identities = 125/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 32661 ATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATT 32720 ||||| |||| |||||| || ||| | || ||||| | || ||| | ||||| | Sbjct 2950128 ATAGCTGGAGCTCTGTGGTGGTACTTTGTGTCAAAAGGAGTTGAGTATTTGGATACAGTG 2950069 Query 32721 TTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTT-TGCACGTATACCACCATTT 32779 |||||||| |||| |||||| |||||||| | |||| | || || || || || | Sbjct 2950068 TTCTTCATCCTGAGGAAGAAAAACAACCAAGT-ATCTTTCCTTCATGTGTATCATCACTG 2950010 Query 32780 TACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 ||| |||||||| || | ||||| || ||||| ||| | ||||||||||| Sbjct 2950009 TACTATGTTTACATTGTGGTGGATCGGCATTAAGTGGGTGGCAGGAGGACA 2949959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603166429217440