Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq36 506 2e-138
seq208 141 8e-29
>seq36
Length=18184789
Score = 506 bits (560), Expect = 2e-138
Identities = 627/858 (73%), Gaps = 0/858 (0%)
Strand=Plus/Plus
Query 6401 GCCAACTCCATCTTCAGGGCCGAGTGCGGCCGGTACCCTTCCAACACGAAGTCCTCGCTC 6460
|||| |||||| || | || | ||| || || |||| | || ||||||||| |
Sbjct 7685786 GCCATCTCCATTTTAATAGCTGGGTGAGGGTTATAGTCTTCAATCAGGAAGTCCTCAGCC 7685845
Query 6461 CTAAAGTCATCGATTGAGGTGACGGCTCGAATAATTTTGAGCTGGGGGAACGGTCGGGGC 6520
| || ||||| || | |||| |||||| |||| |||||| ||||| |||| ||
Sbjct 7685846 TTGAAATCATCAATGGCTTTGACTTCTCGAAGAATTCTGAGCTTAGGGAAAGGTCTTGGT 7685905
Query 6521 TCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCC 6580
||||| || ||||| || || || | || || |||| ||| ||||| ||||| |||
Sbjct 7685906 TCTCGCTGAAGCTGAATTTTCAGTGGCCCAATATGATTCAAGTATATATGAGCATCTCCC 7685965
Query 6581 AACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATGAGCGATCATGTACGTGAGC 6640
| || || || | || || || || || ||||||||| |||||||| || |||
Sbjct 7685966 AGAGTGTGTACAAAATCACCTGGCTTCAGGCCTGTGACATGAGCAATCATGTAGGTTAGC 7686025
Query 6641 AGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAG 6700
|| | |||||| |||||||||||||||||||| | ||||| ||||| ||||| || ||
Sbjct 7686026 AGGGAGTAACTGGCAATGTTGAACGGCACCCCAAGGCCCATATCTCCAGATCGCTGGTAT 7686085
Query 6701 AGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGG 6760
||||| || || ||||| |||||| || ||||| || ||||| | |||||| || ||
Sbjct 7686086 AGCTGACAAGAAAGCTCACCATTCAATACATAGAACTGACAGAGAGCGTGGCATGGAGGT 7686145
Query 6761 AGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCA 6820
| ||||||||||| ||||| || || ||||| || ||||| | |||||||||||||| |
Sbjct 7686146 AATGCCATCAGAGGAAGATCTTTAGGATTCCAAGCACACATAATGATCCTTCTGTCATGA 7686205
Query 6821 GGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAG 6880
|| || || | ||||| || || | || || || ||| |||| ||||| |||||
Sbjct 7686206 GGATTGGTTTTGATTGTGTCAATGACTTTTTGTAGTTGATCCACTCCTTGTCCAGAATAA 7686265
Query 6881 TCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGG 6940
|| | | || | || || |||||||| |||||||||||||| || || || ||
Sbjct 7686266 TCTGTATTCATCTCTTTGTATTCTGCCCCAAAATGTCTCCACTGGAAGCCATACACTGGT 7686325
Query 6941 CCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCG 7000
||||| || || ||||| | | | ||||||| ||||||||| |||||||||||| ||
Sbjct 7686326 CCCAAATCTCCTTCCTCTCTGGTAGTGAACCCCTGCTTGTCCAAAAAGTCTCGAGATCCA 7686385
Query 7001 TGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTC 7060
| ||||||||||| || || || || ||||||||||| | || |||| ||| |
Sbjct 7686386 TTGGCGTCCCAGATTTTTACTCCTTTGGCAGAGAGCTCCTTAGCATTTGTGGAACCCTTA 7686445
Query 7061 ACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGC 7120
| ||||||||||||||||| | ||| ||||||||| ||||||| || || |||||||
Sbjct 7686446 ATAAACCACAGCAGCTCCTCCAGCACACCCTTCCAGAACACACGCTTGGTTGTCAGCAAA 7686505
Query 7121 GGAAATTCGCCCCGAAGGTTGTATCGGGCCTGTGTGCCGAACACGGAGAGGGTCCCCGTC 7180
||||| || | || |||||||| ||||| || ||| ||||| || | ||| || ||
Sbjct 7686506 GGAAACTCATCTCGGAGGTTGTAGCGGGCTTGCAAGCCAAACACAGACACGGTGCCGGTG 7686565
Query 7181 CCGGTCCGGTCCCCCTTCCGGTAGCCCTCCCTGAGGATCCGCGCCACCTGATACAGATAC 7240
|| || |||||| ||||| | |||| | | ||||| || | | ||| | |||||||
Sbjct 7686566 CCCGTGCGGTCCTCCTTCTTGCAGCCATGCTGCAGGATGTGCTCGATCTGCTCCAGATAC 7686625
Query 7241 TGCCACTCCCCATGCGGT 7258
||| |||||||||| ||
Sbjct 7686626 TGCTTCTCCCCATGCAGT 7686643
Score = 506 bits (560), Expect = 2e-138
Identities = 627/858 (73%), Gaps = 0/858 (0%)
Strand=Plus/Minus
Query 34087 ACCGCATGGGGAGTGGCAGTATCTGTATCAGGTGGCGCGGATCCTCAGGGAGGGCTACCG 34146
|| |||||||||| |||||||||| | ||| | | || ||||| | | |||| |
Sbjct 7686643 ACTGCATGGGGAGAAGCAGTATCTGGAGCAGATCGAGCACATCCTGCAGCATGGCTGCAA 7686584
Query 34147 GAAGGGGGACCGGACCGGGACGGGGACCCTCTCCGTGTTCGGCACACAGGCCCGATACAA 34206
||||| |||||| || || || || ||| | || ||||| ||| || ||||| |||||
Sbjct 7686583 GAAGGAGGACCGCACGGGCACCGGCACCGTGTCTGTGTTTGGCTTGCAAGCCCGCTACAA 7686524
Query 34207 CCTTCGGGGCGAATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGA 34266
||| || | || ||||| ||||||| || || ||||||| ||||||||| ||| | ||
Sbjct 7686523 CCTCCGAGATGAGTTTCCTTTGCTGACAACCAAGCGTGTGTTCTGGAAGGGTGTGCTGGA 7686464
Query 34267 GGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGT 34326
||||||||||||||| | | ||| |||| || | ||||||||||| || || ||
Sbjct 7686463 GGAGCTGCTGTGGTTTATTAAGGGTTCCACAAATGCTAAGGAGCTCTCTGCCAAAGGAGT 7686404
Query 34327 GAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCG 34386
|| ||||||||||| | || |||||||||||| ||||||||| ||||||| | | |
Sbjct 7686403 AAAAATCTGGGACGCCAATGGATCTCGAGACTTTTTGGACAAGCAGGGGTTCACTACCAG 7686344
Query 34387 GGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
||||| || || ||||| || || || || |||||||||||||| |||||||| || ||
Sbjct 7686343 AGAGGAAGGAGATTTGGGACCAGTGTATGGCTTCCAGTGGAGACATTTTGGGGCAGAATA 7686284
Query 34447 TCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGA 34506
| || | | || ||||| ||||| |||| ||| || || || | || || ||
Sbjct 7686283 CAAAGAGATGAATACAGATTATTCTGGACAAGGAGTGGATCAACTACAAAAAGTCATTGA 7686224
Query 34507 CACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGA 34566
||| | || || ||| |||||||||||||| | ||||| || ||||| || || ||
Sbjct 7686223 CACAATCAAAACCAATCCTCATGACAGAAGGATCATTATGTGTGCTTGGAATCCTAAAGA 7686164
Query 34567 TCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGG 34626
||| ||||||||||| | || || |||||| | ||||| || ||||| || ||||||
Sbjct 7686163 TCTTCCTCTGATGGCATTACCTCCATGCCACGCTCTCTGTCAGTTCTATGTATTGAATGG 7686104
Query 34627 GGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAA 34686
||||| || || ||||| || || ||||| ||||| ||||| | ||||||||||||||
Sbjct 7686103 TGAGCTTTCTTGTCAGCTATACCAGCGATCTGGAGATATGGGCCTTGGGGTGCCGTTCAA 7686044
Query 34687 CATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGG 34746
|||||| |||||| | ||||| || |||||||| ||||||||| || || || ||
Sbjct 7686043 CATTGCCAGTTACTCCCTGCTAACCTACATGATTGCTCATGTCACAGGCCTGAAGCCAGG 7685984
Query 34747 GGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCG 34806
|| | || || || |||| ||||| ||||| ||| |||| || || | || ||
Sbjct 7685983 TGATTTTGTACACACTCTGGGAGATGCTCATATATACTTGAATCATATTGGGCCACTGAA 7685924
Query 34807 GATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCGAGCCGTCAC 34866
|| ||||| || ||||| || |||| ||||| |||||| |||| |||||| ||||
Sbjct 7685923 AATTCAGCTTCAGCGAGAACCAAGACCTTTCCCTAAGCTCAGAATTCTTCGAGAAGTCAA 7685864
Query 34867 CTCAATCGATGACTTTAGGAGCGAGGACTTCGTGTTGGAAGGGTACCGGCCGCACTCGGC 34926
| || ||||| || | | ||||||||| || | |||| || || ||| | ||
Sbjct 7685863 AGCCATTGATGATTTCAAGGCTGAGGACTTCCTGATTGAAGACTATAACCCTCACCCAGC 7685804
Query 34927 CCTGAAGATGGAGTTGGC 34944
| || |||||| ||||
Sbjct 7685803 TATTAAAATGGAGATGGC 7685786
>seq208
Length=5466430
Score = 141 bits (156), Expect = 8e-29
Identities = 128/161 (80%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
||||| ||||||||||| || || || |||||| | ||||| || ||||| || ||||
Sbjct 1463442 GATCTTCCTCTGATGGCACTGCCTCCATGCCACGCTCTCTGTCAGTTCTATGTATTGAAT 1463501
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| ||||| || || ||||| || || ||||| ||||| ||||| | || |||||||||
Sbjct 1463502 GGTGAGCTTTCTTGTCAGCTATACCAGCGATCTGGAGATATGGGCCTCGGAGTGCCGTTC 1463561
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || |||||| | ||||| || |||||||| |||||
Sbjct 1463562 AACATCGCCAGTTACTCCCTGCTAACCTACATGATTGCTCA 1463602
Score = 141 bits (156), Expect = 8e-29
Identities = 128/161 (80%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
||||| |||||||| || ||||| | |||||| || |||||||||||||| || | |||
Sbjct 1463602 TGAGCAATCATGTAGGTTAGCAGGGAGTAACTGGCGATGTTGAACGGCACTCCGAGGCCC 1463543
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
|| ||||| ||||| || || ||||| || || ||||| |||||| || ||||| ||
Sbjct 1463542 ATATCTCCAGATCGCTGGTATAGCTGACAAGAAAGCTCACCATTCAATACATAGAACTGA 1463483
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
||||| | |||||| || || || ||||||||||| |||||
Sbjct 1463482 CAGAGAGCGTGGCATGGAGGCAGTGCCATCAGAGGAAGATC 1463442
Score = 120 bits (132), Expect = 3e-22
Identities = 119/154 (77%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352
|||| || | ||||||||||| || || || || ||||||||||| | || ||||
Sbjct 1460097 CCACAAATGCTAAGGAGCTCTCTGCCAAAGGAGTAAAAATCTGGGACGCCAATGGATCTC 1460156
Query 34353 GAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCT 34412
|||||||| ||||||||| ||||||| | | | ||||| || || ||||| || || |
Sbjct 1460157 GAGACTTTTTGGACAAGCAGGGGTTCACTACCAGAGAGGAAGGAGATTTGGGACCTGTAT 1460216
Query 34413 ACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
| || |||||||||||||| |||||||| || ||
Sbjct 1460217 ATGGCTTCCAGTGGAGACATTTTGGGGCAGAATA 1460250
Score = 120 bits (132), Expect = 3e-22
Identities = 119/154 (77%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || |||||||| |||||||||||||| || || || || ||||| || || |||||
Sbjct 1460250 TATTCTGCCCCAAAATGTCTCCACTGGAAGCCATATACAGGTCCCAAATCTCCTTCCTCT 1460191
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | | ||||||| ||||||||| |||||||||||| || | ||||||||||| ||
Sbjct 1460190 CTGGTAGTGAACCCCTGCTTGTCCAAAAAGTCTCGAGATCCATTGGCGTCCCAGATTTTT 1460131
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052
|| || || ||||||||||| | || ||||
Sbjct 1460130 ACTCCTTTGGCAGAGAGCTCCTTAGCATTTGTGG 1460097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448251720148320
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