Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04- 18] 1,906 sequences; 3,192,565,135 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq36 82.4 3e-11 >seq36 Length=18184789 Score = 82.4 bits (90), Expect = 3e-11 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA-GGTAAGCTTTC 52168 ||||| || |||| ||||| | || | || ||||||||| |||| ||| ||||||| Sbjct 7686153 ATGGCATTACCTCCATGCCACGCTCTCTGTCAGTTCTATGTAT-TGAATGGTGAGCTTTC 7686095 Query 52169 GTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAG 52228 || || | || ||||| |||| || ||| | | || || ||||| ||||||||||| Sbjct 7686094 TTGTCAGCTATACCAGCGATCTGGAGATATGGGCCTTGGGGTGCCGTTCAACATTGCCAG 7686035 Query 52229 CTATTCCTTGCTGACGCATCTGATTGCTC 52257 || ||| |||| || | ||||||||| Sbjct 7686034 TTACTCCCTGCTAACCTACATGATTGCTC 7686006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190091697414660