Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq73 84.2 2e-11
seq103 82.4 6e-11
>seq73
Length=13007589
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 111193 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111252
|| |||||||| ||||| ||||||||||| | |||| ||||||||| ||| |||||
Sbjct 8615659 GATAAAGAAGGTATTCCCCCTGATCAACAAAGATTGATTTTTGCGGGCAAGCAACTGGAA 8615600
Query 111253 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111312
||| | |||| || | || || || || || || |||||||| || ||| | || ||
Sbjct 8615599 GATGGTCGAACTTTGTCTGACTACAACATTCAGAAGGAATCTACCCTTCATCTTGTTCTG 8615540
Query 111313 CGTCTGCGCGGTGG 111326
| || || |||||
Sbjct 8615539 AGGCTTCGTGGTGG 8615526
>seq103
Length=10584223
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/227 (68%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| || ||||| || || ||||| ||||| ||||| ||| ||||| ||| |||||
Sbjct 9900824 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACC-TGGAAGTGGAGCCCAGT 9900882
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| | ||| | || || ||| || |||||||||||| | ||| ||| ||
Sbjct 9900883 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCCGACCAG 9900942
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
|| ||| | || | ||| || || || |||||||| | || || | || || ||
Sbjct 9900943 CAGAGGTTGATCTTTGCCGGGAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACTACAAC 9901002
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| || ||||| || || || || || || | ||||| | |||||
Sbjct 9901003 ATCCAGAAAGAGTCCACCCTGCACTTGGTCCTTCGTCTCAGAGGTGG 9901049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421801401589456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |