Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17]
35,974 sequences; 3,174,693,010 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq571 111 2e-19
seq6963 96.9 4e-15
>seq571
Length=175726
Score = 111 bits (122), Expect = 2e-19
Identities = 96/119 (81%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
|| ||||| || || ||||| || ||||||||||| || |||||| |||||||||||
Sbjct 169062 TCATCTCTACTAATTAGTTCATTAGAAAAAGTTAATCCAGGCATTAAACCTCGTTTCTTG 169003
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344
| ||||||||| | ||||| || || |||||||| || || ||||||| |||||||||
Sbjct 169002 AGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCAACAGCTGCAAAAGC 168944
Score = 84.2 bits (92), Expect = 2e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 15902 ACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAA 15961
|| |||||||| ||||| || | || | || || ||||||||||||||||| || ||
Sbjct 172696 ACTCCCATTCTCTGGTATTCTCCTACTCTCTTCTCAAAGAAGTTAGTTTTTCCTTCCAAT 172637
Query 15962 GATATATTTTCCATAAAATCAAAGGGATT 15990
|| ||||| |||||||||||||| |||||
Sbjct 172636 GAGATATTCTCCATAAAATCAAATGGATT 172608
>seq6963
Length=4024090
Score = 96.9 bits (106), Expect = 4e-15
Identities = 94/121 (78%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
|| ||||||||||| ||||| ||||||||||| | || ||||| |||| |||||
Sbjct 2874078 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTCTTCTTA 2874137
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCG 16345
| ||| ||||| |||||||| || ||||| ||||| || || || |||| || ||||||
Sbjct 2874138 AGCCAAAATATAGCAGCAAACGAACCCGAGAAGAAAATCCCTTCTACAGCAGCGAAAGCG 2874197
Query 16346 A 16346
|
Sbjct 2874198 A 2874198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511184429729680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |