Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq6894 89.7 4e-13 >seq6894 Length=939852 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||| || ||||| ||||| |||| || || || |||| || ||||| ||||| |||| Sbjct 59437 TCAGACCTGTGACATGAGCAATCATGTAGGTGAGCAGGGAATAACTGGCAATGTTGAACG 59378 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | |||||||||||||| || | || | || || | ||| || || ||||| || Sbjct 59377 GCACCCCGAGGCCCATATCTCCAGATCGTTGATATAACTGACAAGAGAGCTCGCCATTCA 59318 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 | || |||||||| | | ||||||| ||||| | |||||| Sbjct 59317 GTATATAGAACTGACAGAGAGCGTGACATGGAGGCAATGCCATC 59274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427588448831520