Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq7240 167 5e-36 seq22597 165 2e-35 seq22615 154 3e-32 seq6982 127 5e-24 seq6888 125 2e-23 seq118 118 2e-21 seq6963 116 9e-21 seq22501 113 1e-19 seq171 104 5e-17 seq571 98.7 2e-15 seq7502 86.0 1e-11 seq324 86.0 1e-11 seq33301 84.2 5e-11 >seq7240 Length=45712 Score = 167 bits (184), Expect = 5e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | ||| || | || | |||||||| ||||| || || |||||| Sbjct 6461 ATCCCACCTCTGAGACGAAGGACCAAGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCA 6402 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||| ||||| || || |||||||||||||||| ||||| ||||| || Sbjct 6401 GACAGGGTGCGACCATCTTCCAGCTGCTTTCCAGCAAAAATTAATCTCTGCTGATCTGGG 6342 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||||||||| |||||||| || ||||| || | ||| || || || ||| Sbjct 6341 GGGATGCCTTCTTTATCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCT 6282 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || ||||| || || | || || || || |||||||| Sbjct 6281 ACTTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAAATCTGCAT 6232 Score = 140 bits (154), Expect = 7e-28 Identities = 173/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | ||| || | || | || ||||||||||| || || |||||| Sbjct 6233 ATCCCACCTCTGAGACGAAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCA 6174 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | |||| || ||||| || || ||||| ||||| || | ||||| || || || Sbjct 6173 GACAAGGTTCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCTGGG 6114 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || |||||||| || || || ||||| || | ||| || || || || Sbjct 6113 GGAATGCCTTCCTTGTCCTGAATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 6054 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGT 104566 || || || || || ||||| ||||| | || || ||||| ||||||||| | ||| Sbjct 6053 ACTTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATTGTCTGT 5997 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||||||||| || || |||||||| || || | || ||||| || || |||||| Sbjct 7272 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTTCCA 7213 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | ||||| || || || || || |||||||| || ||||| || || || Sbjct 7212 GCAAAGATCAATCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGAATTTTGGCCTTG 7153 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || || || || || || || || || || ||||| || | ||| Sbjct 7152 ACATTCTCAATGGTGTCACTGGGCTCCACTTCAAGGGTGATGGTTTTACCGGTCAAGGTT 7093 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 7092 TTCACAAAGATCTGCAT 7076 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 104441 TGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCG 104500 || || || || || |||||||||||||| |||||||| || |||||||| | |||||| Sbjct 6578 TGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTTGCCTTGACATTTTCAATGGTATCA 6519 Query 104501 CTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||||||| || || || || ||||| ||||| | || || || || |||||||| Sbjct 6518 CTGGGTTCTACTTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAAATCTGCAT 6460 >seq22597 Length=1249212 Score = 165 bits (182), Expect = 2e-35 Identities = 177/234 (76%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | || || ||||| | || ||||||||||| || || |||||| Sbjct 1181553 ATACCACCTCTGAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCA 1181494 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||||||||| || || || || ||||| || |||||||| || |||||| Sbjct 1181493 GACAGGGTACGACCGTCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGA 1181434 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || ||||| || || || || | ||| ||||| || | ||||| || || || Sbjct 1181433 GGGATGCCCTCTTTGTCTTGGATTTTGGTTTTGACATTCTCAATAGTATCACTGGGCTCC 1181374 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 ||||| || || || ||||| || || || ||||| ||||| ||||||||| || Sbjct 1181373 ACCTCCAGGGTGATGGTCTTCCCTGTCAGGGTTTTCACAAAGATCTGCATTGTG 1181320 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || | || || ||||| | || ||||||||||| || || |||||||| Sbjct 1182831 CCACCTCTGAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 1182772 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || || | ||| ||||| || || || || ||||| || |||||||| || |||||||| Sbjct 1182771 AGGGTACGACCATCTTCCAGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGAGGG 1182712 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || |||||||| || || || || ||||| ||||| || | ||||| || || || || Sbjct 1182711 ATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTATCACTGGGCTCCACT 1182652 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || ||||| || || || || || ||||| |||||||| Sbjct 1182651 TCTAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1182605 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | || || ||||| | || ||||||||||| || || |||||| Sbjct 1181781 ATACCACCTCTGAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCA 1181722 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||| ||||| || || || || ||||| || |||||||| || |||||| Sbjct 1181721 GACAGGGTACGACCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGA 1181662 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || ||||| || || || || ||||| ||||| || | ||||| || || || Sbjct 1181661 GGGATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTATCACTGGGCTCC 1181602 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || ||||| || || || || || ||||| |||||||| Sbjct 1181601 ACTTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1181552 >seq22615 Length=203576 Score = 154 bits (170), Expect = 3e-32 Identities = 153/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | ||| |||| || | || ||||||||||| || || |||||| Sbjct 192871 ATCCCACCTCTGAGACGAAGGACTAAGTGAAGAGTTGATTCTTTCTGGATGTTGTAGTCA 192812 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||| ||||| || || ||||| |||||||| | ||||| || || || Sbjct 192811 GACAGGGTGCGACCATCTTCCAGCTGCTTTCCGGCAAAAATCAATCTCTGCTGGTCTGGG 192752 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||||||||| |||||||| || |||||||| | |||||| || |||||| Sbjct 192751 GGGATGCCTTCTTTATCCTGGATCTTTGCCTTGACATTTTCAATGGTATCACTGGGTTCT 192692 Query 104510 ACCTCTAGTGTAATAGTC 104527 || || || || ||| || Sbjct 192691 ACTTCAAGGGTGATATTC 192674 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | ||| || | || | || ||||| ||||| || || |||||| Sbjct 193099 ATCCCACCTCTGAGACGAAGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCA 193040 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| || || ||||||||||| || | ||||| ||||| || Sbjct 193039 GACAGGGTACGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGG 192980 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||||||||| |||||||| || ||||| || | ||| || || || || Sbjct 192979 GGGATGCCTTCTTTATCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 192920 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || |||||||| | || || ||||| |||||||| Sbjct 192919 ACTTCAAGGGTGATGGTTTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 192870 >seq6982 Length=3457922 Score = 127 bits (140), Expect = 5e-24 Identities = 145/194 (75%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||||||||| || || |||||||| || || | || ||||| || || |||||| Sbjct 878033 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACACCCATCTTCCAGCTGGTTTCCA 878092 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||| | | | ||||| || || | || || ||||||||||| ||||| || || || Sbjct 878093 GCACA--TCAATCTCTGCTGGTCTAGGGGAATGCCTTCTTTATCTTGAATTTTGGCCTTG 878150 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| || ||||| || || || || || || ||||| || | ||| Sbjct 878151 ACATTCTCAATGGTATCACTGGGTTCCACTTCAAGGGTGATGGTTTTACCGGTCAAGGTT 878210 Query 104543 TTTACAAATATCTG 104556 || ||||| ||||| Sbjct 878211 TTCACAAAGATCTG 878224 >seq6888 Length=4066119 Score = 125 bits (138), Expect = 2e-23 Identities = 148/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||||||||| || | |||||||| || || | || |||| ||||| |||||| Sbjct 2510388 GTGGATTCTTTCTGGATGCTGTAGTCAGACAGGGTACACCCACCTTCCAGTTGCTTTCCA 2510447 Query 104423 GCAAAAATTAGCCTCTGTTGATCAG-GAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 |||||||||| ||||| | || | | || || |||||||||||||| ||||| | || Sbjct 2510448 GCAAAAATTAATCTCTGCCGCTCTGAGGGGGATGCCTTCTTTATCCTGGATCTTCACCTT 2510507 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | |||||| || || | || | || || || ||||||||||| | || Sbjct 2510508 GACATTCTCAATGGTATCACTGGGCTTCACTCCAAGGGTGATGGTCTTACCAGTCAAAGT 2510567 Query 104542 TTTTACAAATATCTGCATT 104560 || ||||| | |||||| Sbjct 2510568 CTTCACAAAGAAATGCATT 2510586 >seq118 Length=1243895 Score = 118 bits (130), Expect = 2e-21 Identities = 149/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT--TTTC 104420 || ||||||||||| || || |||||||| || || || |||| ||||| |||| Sbjct 315049 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTATGCCCACCTTCCAGTTGGGCTTTC 314990 Query 104421 CAGCAAAAATTAGCCTCTGTTGATCAGGAGGT-ATTCCTTCTTTATCCTGAATCTTTGCT 104479 |||||||||||| ||||| || || || || || | |||||||||||| ||||| | Sbjct 314989 CAGCAAAAATTAATCTCTGCTGCTCTGGGGGGGATGCTTTCTTTATCCTGGATCTTCACC 314930 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || ||||| || | ||| || || || | || || || || || ||||||||||| || Sbjct 314929 TTGACATTCTCAATGGTGTCACTGGGCTTCACTTCAAGGGTCATGGTCTTACCAGTCAG- 314871 Query 104540 GTTTTTACAAATATCTGCATT 104560 || || ||||| | |||||| Sbjct 314870 GTCTTCACAAAGAAATGCATT 314850 >seq6963 Length=4024090 Score = 116 bits (128), Expect = 9e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185 |||||||| | || ||||| || ||||||||||| || ||||| ||||| || ||||| Sbjct 2874211 GGAGAAAGAGTGGTCGCTTTCGCTGCTGTAGAAGGGATTTTCTTCTCGGGTTCGTTTGCT 2874152 Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245 ||||| |||||| | ||||| ||||| |||||||| ||| | ||||| || || ||| | Sbjct 2874151 GCTATATTTTGGCTTAAGAAGAGAGGTCTTATGCCTGGACTCACTTTTTCCAATGAACTC 2874092 Query 269246 ATAAGCAGGGACGA 269259 || ||||| || || Sbjct 2874091 ATCAGCAGAGATGA 2874078 >seq22501 Length=2343730 Score = 113 bits (124), Expect = 1e-19 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 78494 TGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCATCCTACGA 78553 |||||||| | | | || |||||| | || || | ||||| | |||||||| || | Sbjct 1772542 TGGTGGTACTTTGTGTCAAAAGGAGTTGAGTATTTGGATACAGTGTTCTTCATTCTGAGG 1772483 Query 78554 AAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGTTTACTTTG 78613 |||||| |||||| | ||| || ||||| |||||||| | |||||||||||| ||| Sbjct 1772482 AAGAAAAACAATCAAGTATCTTTCCTTCATGTGTATCATCACTGTACTATGTTTACATTG 1772423 Query 78614 GGATGGATAGGTATTAAATGGTTCGCAGGAGGACAAG 78650 | ||||| || ||||| ||| | ||||||||||||| Sbjct 1772422 TGGTGGATTGGCATTAAGTGGGTAGCAGGAGGACAAG 1772386 >seq171 Length=1430361 Score = 104 bits (114), Expect = 5e-17 Identities = 98/124 (79%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 104367 ATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAA 104426 ||||||||| ||||||||| ||||| | | || | | ||||| |||| || || |||| Sbjct 181586 ATTCTTTCTTAATATTATAATCAGACAAAATTATTCA-TCTTCCTGTTGCTTGCCTGCAA 181644 Query 104427 AAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACAT 104486 |||| | |||||||||||||||| || ||| | ||||| || ||||| ||||| |||| Sbjct 181645 AAATAATTCTCTGTTGATCAGGAGTAATACCTCCCTTATCTTGTATCTTAGCTTTGACAT 181704 Query 104487 TTTC 104490 |||| Sbjct 181705 TTTC 181708 >seq571 Length=175726 Score = 98.7 bits (108), Expect = 2e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || |||||||| ||||| ||||| || |||||||| || |||||||| | || || ||| Sbjct 168941 GTAGCTTTTGCAGCTGTTGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCCATATTCTGG 169000 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 | |||||| |||| | ||||| ||||||||||| ||||| ||| | || || || || Sbjct 169001 CTCAAGAAACGAGGTTTAATGCCTGGATTAACTTTTTCTAATGAACTAATTAGTAGAGAT 169060 Query 269258 GA 269259 || Sbjct 169061 GA 169062 Score = 87.8 bits (96), Expect = 4e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 269495 GAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAG 269554 |||||||| ||| ||||||||||||||| ||||| ||||| || |||| ||||| ||| Sbjct 172605 GAAAATCCATTTGATTTTATGGAGAATATCTCATTGGAAGGAAAAACTAACTTCTTTGAG 172664 Query 269555 AAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTC 269592 ||| | ||| | | || |||| |||||| || ||||| Sbjct 172665 AAGAGAGTAGGAGAATACCAGAGAATGGGAGTGATGTC 172702 >seq7502 Length=209603 Score = 86.0 bits (94), Expect = 1e-11 Identities = 131/186 (70%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 104367 ATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGC-- 104424 |||||||||||| ||| | |||| |||| || || |||||||| || |||||| | Sbjct 174743 ATTCTTTCTGAAAATTGTTGTCAAATAGGGTATGGCCATCTTCTAGCTGCTTTCCAACAA 174684 Query 104425 AAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTAC 104484 |||||| | |||| | || || || |||| |||||||| || |||| || || Sbjct 174683 AAAAATCAATCTCTTCTACTCCGGGAAAATGTCTTCCTTATCCTGGATTTTTGACTTGAC 174624 Query 104485 ATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTT 104544 ||| | | || || || ||||||| || || | ||||| |||||||| | || || Sbjct 174623 ATTCGCAATTGTGTCACTGAGTTCTACTTCAAGGTTGATAGTTTTACCAGTCAAGGTCTT 174564 Query 104545 TACAAA 104550 ||||| Sbjct 174563 CACAAA 174558 >seq324 Length=176121 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 |||||||| || |||||||| | ||||| || ||||| |||||||| ||||||||||| Sbjct 149761 TTCTGAATGTTGTAGTCAGACAAAGTTCGTCCATCTTCCAGTTGTTTGCCAGCAAAAATC 149820 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCT 104458 | || ||||||||||| || || ||| Sbjct 149821 AATCTTTGTTGATCAGGGGGAATACCT 149847 >seq33301 Length=39358 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGA-ATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 ||||||| ||| | || || ||| |||| |||| | || ||||| | || ||||| Sbjct 1103 GTAGATTTTTTTCCAGATGTTGTAGACAGACAGAGCTTGTCCATCTTCCAACTGCTTTCC 1162 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||||| || | |||||| ||||| | | || |||||||| |||||||||||||| | Sbjct 1163 GGCAAAGATCAACCTCTGCTGATCCAGGGCAATGCCTTCTTTGTCCTGAATCTTTGCCCT 1222 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 | || | | ||| || | || || | || |||| || |||||||||| | || Sbjct 1223 GATGTTCTTAATGGTGTCACCGGGCTCCATTTCAGGTGTGATGCTCTTACCAGTCAAGGT 1282 Query 104542 TTTTACAAATATCTGCAT 104559 || | ||| |||||||| Sbjct 1283 CTTCATAAA-ATCTGCAT 1299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150867701047592