Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq6894 107 1e-18 >seq6894 Length=939852 Score = 107 bits (118), Expect = 1e-18 Identities = 125/169 (74%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 25772 TCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGT 25831 |||| || |||| ||||| || |||| ||||||||||| || ||||| ||||| | | Sbjct 56371 TCATTTCTTTGTATTCTGCCCCAAAATGTCTCCACTGGAAGCCATACACTGGTCCCAAAT 56312 Query 25832 CTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 |||| || |||||| || ||| ||| ||||||||||||| || |||||||| | Sbjct 56311 CTCCTTCCTCCCTGGTAGTGAATCCCTGCTTGTCCAAAAAGTCTCGAGATCCATTGGCAT 56252 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||||||| || || || || | ||||| || || | ||||| || || Sbjct 56251 CCCAGATTTTCACTCCTTTGGCAGAGAGTTCCTTAGCATTTGTAGAACC 56203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339988472409102