Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq15323 91.5 3e-13 >seq15323 Length=1134477 Score = 91.5 bits (100), Expect = 3e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 245011 CATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGA 245070 ||||||||| || || ||||| ||||| ||| || ||||||| | |||||| ||| Sbjct 890645 CATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCCCTGGCTCGCTGCTCTTCCTT 890586 Query 245071 GCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTA 245130 |||||||||||| | | || | || ||||||| ||| | |||||| || |||| ||| Sbjct 890585 CCCAGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAGTGCCACGGTTCCAAGTA 890526 Query 245131 GACAGCGAGGGCGCCGGGCCGCT 245153 || || | || || ||||||| Sbjct 890525 GATGGCAAATGCCCCTGGCCGCT 890503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943914554270240