Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq6894 100 3e-16 >seq6894 Length=939852 Score = 100 bits (110), Expect = 3e-16 Identities = 122/164 (74%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 ||||| || |||||||||| ||| || || | |||||||| ||||||||||| || || Sbjct 59435 AGACCTGTGACATGAGCAATCATGTAGGTGAGCAGGGAATAACTGGCAATGTTGAACGGC 59376 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACC-GTCAGC 20355 || || | ||||| ||||| || | ||||| | |||||| || ||||| || |||| Sbjct 59375 ACCCCGAGGCCCATATCTCCAGATCGTTGATATAACTGACAAGAGAGCTCGCCATTCAG- 59317 Query 20356 TACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCA 20399 || ||| || ||||| | |||||| || || | ||||||| Sbjct 59316 TATATAGAACTGACAGAGAGCGTGACATGGAGGCAATGCCATCA 59273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441174325686160