Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq15323 89.7 6e-13 >seq15323 Length=1134477 Score = 89.7 bits (98), Expect = 6e-13 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 116460 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 116519 |||||| ||| ||||||||||| ||||| ||||||||||| || || ||||| || Sbjct 892933 CTCATCTTTACTAGTGTACTCTACTATTTCTGTACACAAATTGCTACATTTGATGGTCCC 892874 Query 116520 CAAGTTCTTTTGATTTGACTTTGTG-TTACACGCATCCTTGTAGAGCATATATGGCGTCC 116578 || ||||| ||| ||| ||| | ||||| || || || ||||| || || |||| Sbjct 892873 CAGGTTCTGCTGA-TTGCTTTTCCGATTACAGCTGTCTTTATATAGCATGTACGGGGTCC 892815 Query 116579 CCGTCTCCGTTTGGGACT 116596 | |||||||| ||||||| Sbjct 892814 CTGTCTCCGTCTGGGACT 892797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613231321149840