Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq15323 86.0 7e-12 >seq15323 Length=1134477 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 |||||| ||| |||||||||| |||||||||||||| ||| || || || ||||| Sbjct 892933 CTCATCTTTACTAGTGTACTCTACTATTTCTGTACACAAATTGCTACATTTGATGGTCCC 892874 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || |||| || || || || || || || || || |||||||| || ||||| Sbjct 892873 CAGGTTCTGCTGATTGCTTTTCCGATTACAGCTGTCTTTATATAGCATGTACGGGGTCCC 892814 Query 106612 CGTCTCCGTCTGTGACT 106628 ||||||||||| |||| Sbjct 892813 TGTCTCCGTCTGGGACT 892797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589715500383760