Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq22518 192 5e-43 seq22463 156 3e-32 seq80 136 3e-26 seq22597 116 3e-20 seq15244 109 4e-18 seq178 102 7e-16 seq7240 96.9 3e-14 seq22615 91.5 1e-12 seq227 87.8 1e-11 >seq22518 Length=3477175 Score = 192 bits (212), Expect = 5e-43 Identities = 374/542 (69%), Gaps = 19/542 (4%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| ||| | ||| || || | ||| |||| ||||| | Sbjct 1975550 GGCATTGATCTTGGCACCACTTATTCCTTTGTGGGAGTCTTCCAATATGGGAAAGTGAAG 1975609 Query 550058 ATTATTGCCAATGATCAAGGTAACA-GAACTACTCCATCTTATGTTTCTTTCACGGAAAC 550116 || ||||| ||||||||||| |||| |||| | ||| | |||||| | |||| || || Sbjct 1975610 ATCATTGCTAATGATCAAGGAAACAGGAACACCCCCAGC-TATGTTGCCTTCATTGACAC 1975668 Query 550117 TGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTAT 550176 ||| ||| |||||||||| |||||| |||||| | ||||| ||||| || || Sbjct 1975669 AGAATGATTAATTGGTGATGCTGCAAAAAATCAAG----TTGTAAT-GAACCAACACAAT 1975723 Query 550177 TTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATAT 550236 ||||||||| |||||| | ||||| ||| ||| ||||| ||| ||| |||| || Sbjct 1975724 TTTTGATGCCAAACGTCTGATTGGTCAAAGATTTGATGATGAAGTTGTACAGTCAGACAT 1975783 Query 550237 GAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA--GCTACT 550294 ||||||||||||||| | | || ||| | || | ||| | | || | | Sbjct 1975784 GAAGCATTGGCCTTTTACAGTGGTGAATAACACAGGCAGGCCTAAGGTCCAAGTGGAATA 1975843 Query 550295 CATGAAGGATCTGTTAAACAATTT-TCACCAGAACAAATTTCATCTATGGTTTTAATGAA 550353 || |||| | ||| | ||| | || || || | || || ||||| |||| || Sbjct 1975844 CAAAGAGGA--TACCAAAAAGTTTCTATCCTAAAGAAGTATCTTCCATGGTCTTAACCAA 1975901 Query 550354 AATGAAACAAACAGCCAGTG---CTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAAC 550410 ||||||| ||| | ||| ||| || | || || || |||| || | || Sbjct 1975902 AATGAAAGAAATTG---GTGAAACTTACCTTTGGAAAACTGTCACAAATGCTGTGGTCAC 1975958 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 | | |||| ||||| ||||| || |||| ||| || || |||||||||||| ||||| Sbjct 1975959 AGGATCAGCCTATTTCAATGATTCCCAACATCAGGCCACAAAAGATGCTGGAACCATTGC 1976018 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 ||| || ||||| || | || |||||||| || |||||||||| |||| ||||| || Sbjct 1976019 TGGTCTCAATGTGCTCCAAATCATCAATGAGCCAACTGCTGCTGGTATTGCTTATGG-CT 1976077 Query 550531 TG 550532 || Sbjct 1976078 TG 1976079 >seq22463 Length=748140 Score = 156 bits (172), Expect = 3e-32 Identities = 530/815 (65%), Gaps = 12/815 (1%) Strand=Plus/Minus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAA 551849 ||||| | || || ||||| || || ||||||||| |||| ||| | |||||| Sbjct 308873 GGAGACACCCACCTGGGTGGGGAGGACTTTGATAATCGACTAGTAAACCACTTTGTTGAG 308814 Query 551850 GATTTTAAACGAAAA---AACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGT 551906 || || || |||||| || |||| | || || | | | | | ||| | | | Sbjct 308813 GAATTCAAGCGAAAACATAAGAAAGAT-AT-TAGCCAGAACAAGCGT-GCTGTGAGAAGA 308757 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 || |||| || || |||||||| || || | || || || | || ||| ||| | || Sbjct 308756 CTTCGAACAGCCTGTGAAAGAGCTAAGAGAACCCTGTCTTCCAGCACCCAAGCCAATCTT 308697 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 ||| | || || || ||||| || ||||| | | |||| || | | ||||| | ||| Sbjct 308696 GAAATTGACTCCTTGTTTGAAGGCATTGACTTTTATACTTCTGTCACTAGGGCAAGGTTT 308637 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 ||||| | || || ||||| || | || | || || ||||| ||| | || Sbjct 308636 GAAGAGCTGTGCTCGGATCTGTTCCGGGGTACCCTGGAGCCCGTAGAGAAAGCCCTGCGA 308577 Query 552087 GATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 ||| | ||||| || ||| ||||| | | || | || ||||| ||||| || || || Sbjct 308576 GATGCCAAGATGGACAAAGCCAAAATTAACGACGTCGTCCTTGTGGGTGGCTCCACCCGA 308517 Query 552147 ATTCCTAAAATTCGCGAAA--TGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAA 552204 || || ||| | | |||| | | || || || |||||| | | | | || | | Sbjct 308516 ATCCCCAAAGTACA-GAAACTTCTGCAGGATTTCTT-CAATGGCAGAGACCTGAACAAGA 308459 Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 || | || || ||||||||||| |||||||| || ||| | || ||||| ||||| | Sbjct 308458 GTATCAACCCTGATGAGGCTGTAGCCTATGGAGCAGCAGTGCAGGCAGCCATTCTGATGG 308399 Query 552265 GACA-AACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTT 552323 | | || | | || ||| | || | | | || | ||||| |||| || || || Sbjct 308398 GTGATAAATCA-GAGAAAGTGCAGGACCTGTTGCTGTTGGATGTGGCTCCCCTTTCCCTG 308340 Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 || | || |||| |||||| | ||||| || ||| | | || | || || || Sbjct 308339 GGGCTGGAGACAGCAGGAGGTGTGATGACAGCACTGATCAAACGCAACTCCACCATCCCC 308280 Query 552384 TGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 ||| | | | | ||| | || ||||| || || || | | ||| || || Sbjct 308279 ACCAAACAGACCCAGATCTTTACCACCTATTCTGACAACCAGCCGGGTGTACTGATCCAG 308220 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTA 552503 | | ||| |||||| | | || || || || || | || || |||| | | Sbjct 308219 GTATATGAGGGAGAACGGGCCATGACCAAGGACAACAACCTGCTGGGCCGTTTTGACCTG 308160 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 || |||||||||||||| ||||| || || || ||||| || || || ||||| ||| Sbjct 308159 AGTGGCATTCCTCCTGCTCCCCGTGGTGTCCCCCAGATTGAGGTAACCTTTGATATTGAT 308100 Query 552564 GCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 |||||||||||| ||||||| || ||| ||||| Sbjct 308099 GCCAATGGAATTCTGAATGTCACCGCTATGGATAA 308065 Score = 150 bits (166), Expect = 1e-30 Identities = 391/590 (66%), Gaps = 16/590 (3%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || ||| | || ||||| || || || || || | || |||| || Sbjct 309527 GCCATCGGCATCGATCTGGGCACCACCTACTCCTGCGTGGGAGTGTTCCAGCATGGCAAG 309468 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || |||||||| || || ||| |||| || || ||||| | ||||| Sbjct 309467 GTGGAGATCATCGCCAATGACCAGGGCAACCGAACCACCCCCAGCTATGTGGCCTTCACA 309408 Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTAC 550167 || || || | | | | |||| |||||||| ||| | || | ||| || |||||| Sbjct 309407 GACACAGAGAGACTCA-TTGGAGATGCAGCCAAAAACCAGGTGGCCA-TG--AATCCTCA 309352 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 || || | ||||| || ||| | | || || | | ||| |||||| || || Sbjct 309351 GAACACAGTCTTTGACGCCAAAAGGCTGATCGGCCGTAAATTTGGAGATTCGGTGGTCCA 309292 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287 | | || |||||||| ||||| ||||| | | || | | || || ||| | || | Sbjct 309291 GTCGGACATGAAGCACTGGCCCTTCCAGGTGATAAACGATGGGGGTAAGCCTAAAGTTCA 309232 Query 550288 AGCTACTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTATGG 550343 || | | |||| | |||||| || | || ||| | || || || |||| Sbjct 309231 AGTGTCCTACAAAGG----GGAAAACAAGGCCTTCTATCCTGAAGAGATCTCCTCCATGG 309176 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 | || | |||||||| | || || || | | ||||| | || || |||||| Sbjct 309175 TGTTGACCAAAATGAAGGAGACTGCTGAGGCCTACTTGGGTCATGCGGTCACCAATGCAG 309116 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | || ||||| || || ||||| |||||||| ||||| || || || || ||||||||| Sbjct 309115 TCATCACTGTCCCGGCCTATTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCTGGAG 309056 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 || ||||| || || || || | || ||||||||||| || || ||||| |||| | Sbjct 309055 TGATCGCTGGCCTGAACGTGCTGAGGATCATCAATGAACCGACAGCAGCTGCCATTGCCT 308996 Query 550524 ATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGAT 550573 ||||||| |||||| || | | ||| |||| || ||||||||| Sbjct 308995 ATGGACTAGATAAAGCTAGTCAGGGAGAGAGACATGTGCTGATCTTTGAT 308946 >seq80 Length=1128347 Score = 136 bits (150), Expect = 3e-26 Identities = 345/520 (66%), Gaps = 6/520 (1%) Strand=Plus/Plus Query 552081 TTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCT 552140 ||||||||| | ||| | |||||||| || | ||||| || || || || ||||| || Sbjct 269869 TTAAGAGATGCCAAGCTAGATAAATCACAAATTCATGACATCGTCCTGGTGGGTGGTTCC 269928 Query 552141 ACAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAA 552198 || | || || ||||| | | | | ||| ||| || |||||| || | | | Sbjct 269929 ACTCGCATCCCCAAAATCCAGAAGCTTCTGCAAGA-CTTCTT-CAATGGCAAGGAGCTCA 269986 Query 552199 ATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTC 552258 | | || | ||||| |||||||||||||| |||||||| || |||| || || ||| Sbjct 269987 ACAAGAGCATCAATCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTTCAGGCTGCCATTT 270046 Query 552259 TTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318 | |||||| | | |||||| | || | | | || | ||||| |||||||| | Sbjct 270047 TGTCTGGAGACAAATCTGAAAATGTGCAGGACTTGCTGCTGTTGGATGTGACTCCTCTTT 270106 Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378 | ||||| | ||||| | |||||| |||| ||| ||| ||| | | ||||| || | Sbjct 270107 CCCTTGGAATTGAAACTGCTGGAGGAGTTATAACTGTTCTCATCAAATGTAATACCACCA 270166 Query 552379 TTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438 | || || | | ||| | || ||||| || || || ||| ||| | Sbjct 270167 TCCCCACCAAGCA--GACAGACCTTTACCACCTATTCTGACAACCAGCCTGGTGTGCTTA 270224 Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498 |||| ||| |||||| || ||| | | || || ||||| || | ||||| | ||| Sbjct 270225 TTCAGGTTTATGAAGGTGAGAGAGCAATGACAAAGGATAACAACCTGCTTGGCAAGTTTG 270284 Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558 | | ||| || || || || || | || || || || |||||||| || || || | Sbjct 270285 AGCTCACAGGAATCCCCCCAGCACCCAGAGGTGTTCCTCAGATTGAAGTAACATTTGACA 270344 Query 552559 TCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 | ||||| ||||| || | ||||| ||||| ||||| Sbjct 270345 TTGATGCAAATGGCATCCTAAATGTTTCTGCTGTGGATAA 270384 >seq22597 Length=1249212 Score = 116 bits (128), Expect = 3e-20 Identities = 161/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||||| || || ||||||||||| |||||| || ||||| |||| || || Sbjct 1182825 CTGAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTA 1182766 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||| || || || || ||||| ||||| || ||||| |||||||| || ||| Sbjct 1182765 CGACCATCTTCCAGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGAGGGATGCCT 1182706 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 ||||| ||||| ||||| ||| || |||||| |||||| || | | || ||| || Sbjct 1182705 TCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTATCACTG-GGCTCCACTTCTAG 1182647 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | || || || || || || || || || || |||||| Sbjct 1182646 GGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATA 1182604 Score = 107 bits (118), Expect = 2e-17 Identities = 159/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||||| || || ||||||||||| |||||| || ||||| |||| || || Sbjct 1181772 CTGAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTA 1181713 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||| || || || || ||||| || || || ||||| |||||||| || || Sbjct 1181712 CGACCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCC 1181653 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 ||||| ||||| ||||| ||| || |||||| |||||| || | | || ||| || Sbjct 1181652 TCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTATCACTG-GGCTCCACTTCCAG 1181594 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | || || || || || || || || || || |||||| Sbjct 1181593 GGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATA 1181551 Score = 102 bits (112), Expect = 7e-16 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||||| || || ||||||||||| |||||| || ||||| |||| || || Sbjct 1181544 CTGAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTA 1181485 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||||| || || || || ||||| || || || ||||| |||||||| || || Sbjct 1181484 CGACCGTCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCC 1181425 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 ||||| ||||| ||||| ||| || |||||| |||||| || | | || || || Sbjct 1181424 TCTTTGTCTTGGATTTTGGTTTTGACATTCTCAATAGTATCACTG-GGCTCCACCTCCAG 1181366 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATAGACATCT 563482 || | || || || || || ||||| || || || ||||| | |||| Sbjct 1181365 GGTGATGGTCTTCCCTGTCAGGGTTTTCACAAAGATCTGCATTGTGATCT 1181316 >seq15244 Length=336998 Score = 109 bits (120), Expect = 4e-18 Identities = 106/135 (79%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | || |||||||| ||||| || || || |||||||| || || ||||||| Sbjct 323760 ATGCTGTGGTCACAGTACCAGCCTATTTCAACGATTCCCAACGTCAGGCCACAAAAGATG 323819 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| || ||||| || ||||| || || || |||||||| || ||||||||||| Sbjct 323820 CTGGAACCATCGCTGGTCTCAATGTGCTCCGAATCATCAATGAGCCAACTGCTGCTGCTA 323879 Query 550518 TTGCATATGGACTTG 550532 |||| ||||| |||| Sbjct 323880 TTGCTTATGG-CTTG 323893 >seq178 Length=2876035 Score = 102 bits (112), Expect = 7e-16 Identities = 148/206 (72%), Gaps = 10/206 (5%) Strand=Plus/Minus Query 550040 CAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTAT 550099 |||||||| ||||| || || ||||| ||||| ||||| ||||| || || ||| ||| Sbjct 369983 CAAAATGGGAAAGTAGAGATCATTGCTAATGACCAAGGAAACAGGACCACCCCAAGCTAT 369924 Query 550100 GTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTG 550157 ||| | |||| | || ||| ||| ||| | |||| ||||| ||||| || || Sbjct 369923 GTTGCCTTCATCAAGACAGAATGATTAATTGATAATGCTGCAAAGAATCAAATTGCAATG 369864 Query 550158 GTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATT 550217 ||||||||||||| |||| |||| ||| | | ||| |||| ||| ||||| Sbjct 369863 --AATCCTACCAATA--GCTTTTTATGCCAAATATCTGATT----GAAGATTTGATGATG 369812 Query 550218 CGACTGTTCAGGCAGATATGAAGCAT 550243 | ||| ||| |||||||||||||| Sbjct 369811 CAGTTGTACAGTCAGATATGAAGCAT 369786 >seq7240 Length=45712 Score = 96.9 bits (106), Expect = 3e-14 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||||| || || | || |||||| ||| || || ||||| |||| || || Sbjct 6452 CTGAGACGAAGGACCAAGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCAGACAGGGTG 6393 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||| || || ||||| |||||||| | ||| |||||||| || || || ||| Sbjct 6392 CGACCATCTTCCAGCTGCTTTCCAGCAAAAATTAATCTCTGCTGATCTGGGGGGATGCCT 6333 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTG-AGTACATTCGAG 563432 |||||||| || || ||| || || |||||| || ||| || | ||| ||| || Sbjct 6332 TCTTTATCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCTAC-TTCAAG 6274 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | || || || || | || || |||||||| ||||| Sbjct 6273 GGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAAATCTGCAT 6232 Score = 96.9 bits (106), Expect = 3e-14 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| |||||||| |||||| || ||||| |||| || || | |||||| | Sbjct 7282 CAAG-TGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCA 7224 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 | || ||||| ||||| || | ||| ||||| || || ||||| |||||||| ||||||| Sbjct 7223 GCTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGAA 7164 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTA 563445 |||| || || |||||| || ||| || | | || ||| || || | |||||| Sbjct 7163 TTTTGGCCTTGACATTCTCAATGGTGTCACTG-GGCTCCACTTCAAGGGTGATGGTTTTA 7105 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || | ||||| || || || ||||| Sbjct 7104 CCGGTCAAGGTTTTCACAAAGATCTGCAT 7076 Score = 87.8 bits (96), Expect = 1e-11 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||||| || || | || ||||| |||||| || ||||| |||| | ||| Sbjct 6224 CTGAGACGAAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAAGGTT 6165 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||| || || ||||||||||| || | ||| ||||| || || ||||| ||| Sbjct 6164 CGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCTGGGGGAATGCCT 6105 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || || || |||||||| || || |||||| || ||| || | | || ||| || Sbjct 6104 TCCTTGTCCTGAATTTTGGCCTTGACATTCTCAATGGTGTCACTG-GGCTCCACTTCAAG 6046 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | || || ||||| | || || || || || ||||| Sbjct 6045 GGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 6004 >seq22615 Length=203576 Score = 91.5 bits (100), Expect = 1e-12 Identities = 155/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||||| || || | || ||||| ||| || || ||||| |||| || || Sbjct 193090 CTGAGACGAAGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTA 193031 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||| || || ||||| ||||| || | ||| |||||||| || || || ||| Sbjct 193030 CGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCT 192971 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 |||||||| || || ||| || || |||||| || ||| || | | || ||| || Sbjct 192970 TCTTTATCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGC-TCCACTTCAAG 192912 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | ||||||||||| | || || || || || ||||| Sbjct 192911 GGTGATGGTTTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 192870 Score = 86.0 bits (94), Expect = 5e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||||| || || | ||||| || |||||| || ||||| |||| || || Sbjct 192862 CTGAGACGAAGGACTAAGTGAAGAGTTGATTCTTTCTGGATGTTGTAGTCAGACAGGGTG 192803 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||| || || |||||||||||||| | ||| ||||| || || || || ||| Sbjct 192802 CGACCATCTTCCAGCTGCTTTCCGGCAAAAATCAATCTCTGCTGGTCTGGGGGGATGCCT 192743 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG 563418 |||||||| || || ||| || || ||||| |||||| || Sbjct 192742 TCTTTATCCTGGATCTTTGCCTTGACATTTTCAATGGTATCACTG 192698 >seq227 Length=684390 Score = 87.8 bits (96), Expect = 1e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | || || || || ||||| ||||| | || |||||||| || Sbjct 483854 GTTACTCATGCAGTTGTTACCGTTCCTGCCTATTTCAATGATGCCCAGCGTCAAGCAACC 483795 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 ||||||||||| ||||||||| |||||||| | | || ||||||||||| Sbjct 483794 AAAGATGCTGGTACTATTGCTGGTCTTAATGTCATGAGGATAATCAATGAACC 483742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027393532637260