Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq22816 82.4 1e-10 >seq22816 Length=44319 Score = 82.4 bits (90), Expect = 1e-10 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 14234 AGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATC 14293 |||| ||||||| ||||| ||||||||||| | || | || || || | |||||| || Sbjct 25428 AGCTGCCCATTTCTGAAAGGTCCCATCTCCCCCAGGTCTGGTCTCAATGTACTCTGTGTC 25487 Query 14294 TTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACC 14353 ||| |||| |||||||| ||| |||| | ||| || |||| |||||||| || Sbjct 25488 TTGGATTTGTTCTTCTCCATCTTTCAACCAAATTATTGAGATTTCAGAAGGATAAAAGCC 25547 Query 14354 CAAAGCCCAGCAC 14366 | |||| | |||| Sbjct 25548 CCAAGCTCTGCAC 25560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629000227077040