Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7008 136 7e-27 >seq7008 Length=922975 Score = 136 bits (150), Expect = 7e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 || |||| ||| ||||| || |||||||| || || |||| | || || | ||| Sbjct 819613 AGCACCTTCTGCTTGAGCTGCGCCACCTGTTCGCGGAGAAGGTTGGCCGTGGACGCCAGC 819672 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | |||||| |||||| |||||||| ||||||| ||| || || || Sbjct 819673 TCCGTGTTCTGGCTCTTGAGGCTCTTCACCTTCTCCTCGAGCCGCGAGATCCGCTCTAGC 819732 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 || ||| |||||| |||| |||||| | ||||||||| || | ||| || ||||||||| Sbjct 819733 TTCCGCTTGCGGCACTTGGAGGCTGCGATGCGGTTCCGCAGCCGCTTGCGCTCCGCCTTG 819792 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 |||||||| ||| ||||||||||| || ||| Sbjct 819793 ATGCGTTCTTGGGTGTCCATGTCGATGGGGGAC 819825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931113912988160