Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq15323 84.2 1e-11 >seq15323 Length=1134477 Score = 84.2 bits (92), Expect = 1e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || | |||||||||||| | ||| | || | ||| || |||| | ||||| || Sbjct 890645 CATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCCCTGGCTCGCTGCTCTTCCTT 890586 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 || ||| ||||| |||| ||| | ||| ||||| || ||| ||||||| ||||| || | Sbjct 890585 CCCAGTG-TTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAGTGCCACGGTTCCAAGT 890527 Query 26052 AGATAGCAAA 26061 |||| ||||| Sbjct 890526 AGATGGCAAA 890517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252929058882050