Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq7240 188 1e-42 seq22615 170 4e-37 seq22597 165 2e-35 seq6888 154 3e-32 seq118 134 3e-26 seq6982 132 9e-26 seq7502 123 5e-23 seq22477 120 6e-22 seq171 113 9e-20 seq338 111 3e-19 seq22501 100 6e-16 seq23437 98.7 2e-15 seq33301 86.0 1e-11 >seq7240 Length=45712 Score = 188 bits (208), Expect = 1e-42 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | ||| || || |||||||| |||||||| ||||| || || || ||||| Sbjct 6458 CCACCTCTGAGACGAAGGACCAAGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCAGAC 6399 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| ||||| || || ||||||||||| |||| ||| || |||||||| || Sbjct 6398 AGGGTGCGACCATCTTCCAGCTGCTTTCCAGCAAAAATTAATCTCTGCTGATCTGGGGGG 6339 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| ||||| || |||||||| || ||||| ||||| || ||| | || |||||| Sbjct 6338 ATGCCTTCTTTATCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACT 6279 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || |||||||| ||||| ||||| || || |||||||| Sbjct 6278 TCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAAATCTGCAT 6232 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | ||| || || |||||||| || ||||||||||| || || || ||||| Sbjct 6230 CCACCTCTGAGACGAAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 6171 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | ||| || ||||| || || ||||| |||||||| | ||| || || ||||| || Sbjct 6170 AAGGTTCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCTGGGGGA 6111 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || ||||| || || || ||||| ||||| || ||| | || || ||| Sbjct 6110 ATGCCTTCCTTGTCCTGAATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACT 6051 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || | || || |||||||| ||||| ||||| ||||| ||||||||| Sbjct 6050 TCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATT 6003 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 |||||| ||||| ||||| || ||||| || || ||||||||||| || || || ||||| Sbjct 7303 ACCTCCCCTCAAGCGCAGGACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGA 7244 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | || ||||| || || |||||||||||||| | ||| || || ||||| || Sbjct 7243 CAGGGTACGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGGGG 7184 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || ||||| || |||||||| || || || ||||| ||||| || ||| | || || || Sbjct 7183 AATGCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCAC 7124 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| | || || || || || ||||| || || ||||| |||||||| Sbjct 7123 TTCAAGGGTGATGGTTTTACCGGTCAAGGTTTTCACAAAGATCTGCAT 7076 Score = 116 bits (128), Expect = 7e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 82692 TGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCA 82751 || ||||| || || ||||| ||||| || |||||||| || ||||||||||| |||||| Sbjct 6578 TGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTTGCCTTGACATTTTCAATGGTATCA 6519 Query 82752 TTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||||||||| | || || |||||||| ||||| ||||| || || |||||||| Sbjct 6518 CTGGGTTCTACTTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAAATCTGCAT 6460 >seq22615 Length=203576 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | ||| || || |||||||| || ||||| ||||| || || || ||||| Sbjct 193096 CCACCTCTGAGACGAAGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 193037 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || |||||||||||||| | ||| || |||||||| || Sbjct 193036 AGGGTACGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGG 192977 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| ||||| || |||||||| || ||||| ||||| || ||| | || || ||| Sbjct 192976 ATGCCTTCTTTATCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACT 192917 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || || || || ||||| ||||| ||||| |||||||| Sbjct 192916 TCAAGGGTGATGGTTTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 192870 Score = 158 bits (174), Expect = 2e-33 Identities = 144/182 (79%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | ||| || |||||||| ||||| ||||||||||| || || || ||||| Sbjct 192868 CCACCTCTGAGACGAAGGACTAAGTGAAGAGTTGATTCTTTCTGGATGTTGTAGTCAGAC 192809 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| ||||| || || ||||| ||||| || | ||| || || ||||| || Sbjct 192808 AGGGTGCGACCATCTTCCAGCTGCTTTCCGGCAAAAATCAATCTCTGCTGGTCTGGGGGG 192749 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| ||||| || |||||||| || ||||||||||| |||||| | ||||||||| Sbjct 192748 ATGCCTTCTTTATCCTGGATCTTTGCCTTGACATTTTCAATGGTATCACTGGGTTCTACT 192689 Query 82764 TC 82765 || Sbjct 192688 TC 192687 >seq22597 Length=1249212 Score = 165 bits (182), Expect = 2e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| | |||||| || | || || || ||||||||||| || || || |||| Sbjct 1181780 TACCACCTCTGAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAG 1181721 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||| ||||| || || || || |||||||| || || || || || |||| Sbjct 1181720 ACAGGGTACGACCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAG 1181661 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || || ||||| || || ||||| ||||| ||||| |||||| | || || | Sbjct 1181660 GGATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTATCACTGGGCTCCA 1181601 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || || |||||||| |||| ||||| ||||| |||||||| Sbjct 1181600 CTTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1181552 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | |||||| || | || || || ||||||||||| || || || ||||| Sbjct 1182831 CCACCTCTGAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 1182772 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| ||||| || || || || |||||||| || || || || || ||||| Sbjct 1182771 AGGGTACGACCATCTTCCAGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGAGGG 1182712 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| || ||||| || || ||||| ||||| ||||| |||||| | || || ||| Sbjct 1182711 ATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTATCACTGGGCTCCACT 1182652 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || |||||||| |||| ||||| ||||| |||||||| Sbjct 1182651 TCTAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1182605 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| | |||||| || | || || || ||||||||||| || || || |||| Sbjct 1181552 TACCACCTCTGAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAG 1181493 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||||||||| || || || || |||||||| || || || || || |||| Sbjct 1181492 ACAGGGTACGACCGTCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAG 1181433 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || || ||||| || || | ||| ||||| ||||| |||||| | || || | Sbjct 1181432 GGATGCCCTCTTTGTCTTGGATTTTGGTTTTGACATTCTCAATAGTATCACTGGGCTCCA 1181373 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | |||| || || ||||| ||||||| || || ||||| ||||||||| Sbjct 1181372 CCTCCAGGGTGATGGTCTTCCCTGTCAGGGTTTTCACAAAGATCTGCATT 1181323 >seq6888 Length=4066119 Score = 154 bits (170), Expect = 3e-32 Identities = 174/232 (75%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 |||||| ||||| | ||| ||||||||||| || ||||||||||| || | || ||||| Sbjct 2510357 ACCTCCCCTCAAGCACAGGACTAAGTGCAGGGTGGATTCTTTCTGGATGCTGTAGTCAGA 2510416 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTG-GAG 82701 || | | || |||| ||||| ||||||||||| |||| ||| || | |||| | | Sbjct 2510417 CAGGGTACACCCACCTTCCAGTTGCTTTCCAGCAAAAATTAATCTCTGCCGCTCTGAGGG 2510476 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| ||||| || ||||| | || ||||| ||||| |||||| | || | | Sbjct 2510477 GGATGCCTTCTTTATCCTGGATCTTCACCTTGACATTCTCAATGGTATCACTGGGCTTCA 2510536 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 || | | || || ||||| || ||||| ||||| ||||| | |||||||| Sbjct 2510537 CTCCAAGGGTGATGGTCTTACCAGTCAAAGTCTTCACAAAGAAATGCATTAT 2510588 >seq118 Length=1243895 Score = 134 bits (148), Expect = 3e-26 Identities = 171/232 (74%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 |||||| ||||| | ||| |||||||| ||||| ||||||||||| || || || ||||| Sbjct 315080 ACCTCCCCTCAAGCACAGGACTAAGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCAGA 315021 Query 82643 TAGAATTCTACCGTCTTCTAGTT--GTTTTCCAGCAAAGATTAGTCTTTGTTGATCT-GG 82699 || | || |||| |||| | ||||||||||| |||| ||| || || ||| || Sbjct 315020 CAGGGTATGCCCACCTTCCAGTTGGGCTTTCCAGCAAAAATTAATCTCTGCTGCTCTGGG 314961 Query 82700 AGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTC 82759 || || | ||| ||||| || ||||| | || ||||| ||||| || ||| | || | Sbjct 314960 GGGGATGCTTTCTTTATCCTGGATCTTCACCTTGACATTCTCAATGGTGTCACTGGGCTT 314901 Query 82760 TACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| | || || ||||| || ||| | ||||| ||||| | |||||| Sbjct 314900 CACTTCAAGGGTCATGGTCTTACCAGTC-AGGTCTTCACAAAGAAATGCATT 314850 >seq6982 Length=3457922 Score = 132 bits (146), Expect = 9e-26 Identities = 153/204 (75%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 82605 AAGTGCA-GAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAG 82663 ||||||| | || ||||||||||| || || || ||||| || | | || ||||| || Sbjct 878023 AAGTGCAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACACCCATCTTCCAG 878082 Query 82664 TTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAAT 82723 || ||||||||| | | | ||| || || ||| | || || ||||| ||||||||||| Sbjct 878083 CTGGTTTCCAGCACA--TCAATCTCTGCTGGTCTAGGGGAATGCCTTCTTTATCTTGAAT 878140 Query 82724 CTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCC 82783 || || || ||||| ||||| |||||| | ||||| ||||| | || || || || || Sbjct 878141 TTTGGCCTTGACATTCTCAATGGTATCACTGGGTTCCACTTCAAGGGTGATGGTTTTACC 878200 Query 82784 TGTCAACGTCTTTACAAATATCTG 82807 ||||| || || ||||| ||||| Sbjct 878201 GGTCAAGGTTTTCACAAAGATCTG 878224 >seq7502 Length=209603 Score = 123 bits (136), Expect = 5e-23 Identities = 159/218 (73%), Gaps = 5/218 (2%) Strand=Plus/Minus Query 82590 CTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATT 82649 ||||||| |||||| |||| ||| || | ||||||||| || || || |||| | Sbjct 174993 CTCAAACCCAGAACCAAGTACAGGGTGGGTTCTTTCTGGATGTTGTAGTCAGGGTG---- 174938 Query 82650 CTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCT 82709 | ||| | ||| | || |||| ||||||||||| ||| || | ||||||||| || ||| Sbjct 174937 CCACCATGTTCCAACTGCTTTCTAGCAAAGATTA-TCTCTGCTCATCTGGAGGAATGCCT 174879 Query 82710 TCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAA 82769 || || ||||| || || | || ||||| |||| || ||| | || ||| |||| | | Sbjct 174878 TCTTTGTCTTGCATTTTGGTCTTGACATTCTCAAGGGTGTCACTGGGCTCTGCTTCAAGA 174819 Query 82770 GTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTG 82807 || || || || || ||||| | || ||||| ||||| Sbjct 174818 GTGATGGTTTTACCAGTCAAAATTTTCACAAAGATCTG 174781 >seq22477 Length=3372135 Score = 120 bits (132), Expect = 6e-22 Identities = 152/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 82605 AAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGT 82664 ||| ||||| |||||||||| | | ||||| | ||| | ||| || ||||| || Sbjct 1488382 AAGGGCAGAATAGATTCTTTTTTGGTTTTATAGTTAGACAAGGTTCACCCATCTTCCAGC 1488323 Query 82665 TGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATC 82724 || ||| |||||||||||| | | || |||||||| || || |||||||| |||| || Sbjct 1488322 TGCTTTTCAGCAAAGATTAATATCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTAGATT 1488263 Query 82725 TTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC--GTCTTGC 82782 || || || ||||||||||| |||||| || | | ||| | || ||| |||||| Sbjct 1488262 TTGGCCTTGACATTTTCAATAGTATCACCGTGTCCCATTTCAAGGGTGATCAGGTCTTGG 1488203 Query 82783 CTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| || || | ||| |||||||| Sbjct 1488202 CAATCAAAGTATTCATAAAAATCTGCAT 1488175 >seq171 Length=1430361 Score = 113 bits (124), Expect = 9e-20 Identities = 102/127 (80%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 82618 ATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAA 82677 ||||||||| |||||||||||||| | |||| | | ||||| |||| || || |||| Sbjct 181586 ATTCTTTCTTAATATTATAATCAGACAAAATTATTCA-TCTTCCTGTTGCTTGCCTGCAA 181644 Query 82678 AGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACAT 82737 | || | ||| |||||||| |||| || ||| |||||||||| ||||| ||||| |||| Sbjct 181645 AAATAATTCTCTGTTGATCAGGAGTAATACCTCCCTTATCTTGTATCTTAGCTTTGACAT 181704 Query 82738 TTTCAAT 82744 ||||||| Sbjct 181705 TTTCAAT 181711 >seq338 Length=3875509 Score = 111 bits (122), Expect = 3e-19 Identities = 166/233 (71%), Gaps = 16/233 (7%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGA----ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAAT 82638 ||||||| | |||| |||| | ||||| ||||||||||||||| | || || |||| Sbjct 79194 ACCTCCTTTTAAACACAGATTTGAGTAAGTAAAGAGTAGATTCTTTCAGGATTTTGTAAT 79135 Query 82639 CAGATAGAATTCTACCGTCTT-CTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCT 82697 ||||| || | |||| ||| | || || || ||||||||||| | ||| ||||| ||| Sbjct 79134 CAGAT-GAGGTTTACCCACTTTCCAGCTGCTTCCCAGCAAAGATCAATCTCTGTTGCTCT 79076 Query 82698 GGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT 82757 ||| | |||||||| | || | ||||| ||||| |||||| | | | Sbjct 79075 AAAGGGAAGCCTTCCTTGT--------TTACAGTAGACATTCTCAATGGTATCACTGGAT 79024 Query 82758 TCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||| |||| || | ||||| |||| ||||| ||||| |||||||| Sbjct 79023 TCCATTTCAGAAGTGATGG--TTGCCCTTCAATGTCTTCACAAAGATCTGCAT 78973 >seq22501 Length=2343730 Score = 100 bits (110), Expect = 6e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 60139 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGT 60198 |||||| | || | |||||||||| | | || ||||| | || || || ||||| || Sbjct 1772558 GATAGCTGGGGCTCTGTGGTGGTACTTTGTGTCAAAAGGAGTTGAGTATTTGGATACAGT 1772499 Query 60199 GTTTTTCATACTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTT 60258 ||| ||||| || ||||| || ||||| || ||| | || || |||||||| | Sbjct 1772498 GTTCTTCATTCTGAGGAAGAAAAACAATCAAGTATCTTTCCTTCATGTGTATCATCACTG 1772439 Query 60259 TACTATGTTTACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311 |||||||||||| || | ||| | |||||||| ||| | || ||||| |||| Sbjct 1772438 TACTATGTTTACATTGTGGTGGATTGGCATTAAGTGGGTAGCAGGAGGACAAG 1772386 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 59870 GATAAACGTGTAGACAATTGGCTGTTAATGAATTCACCTATTCCTACAATATGTATAAGT 59929 ||||||||||| || || |||| || ||| | || || | |||||| ||||||||||| Sbjct 1787306 GATAAACGTGTTGAAAACTGGCCTTTGATGCAGTCTCCATTGCCTACATTATGTATAAGT 1787247 Query 59930 ACTTTGTATCTAATTATTGTCTGGTTAGGACCTAAATGGATGAAAACTAGAAACGCGTTT 59989 ||| | |||||| || |||| ||| | ||||| ||||||||||| | ||| | | || Sbjct 1787246 ACTCTTTATCTACTTTTTGTGTGGCTGGGACCCAAATGGATGAAGAACAGAGAACCCTTC 1787187 Query 59990 AATATCAGATGGTTGTTGGTCTTATATAATTTTTCTATGGTATTTCTAAACTTTTATAT 60048 | || | | ||||| | | ||||||||| ||||| || || ||| | | ||| Sbjct 1787186 CAGATGCGTTTAGTGTTGATTATCTATAATTTTGGAATGGTTTTACTTAACATGTTTAT 1787128 >seq23437 Length=41122 Score = 98.7 bits (108), Expect = 2e-15 Identities = 160/227 (70%), Gaps = 19/227 (8%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||||||||| || | ||||||||| || || | || ||| | || | | Sbjct 12933 AGCACCAAGTGCAGAGTGGACTTTTTCTGTATGTTGTAGT-TGAAAGAGTCTGGCCATAT 12991 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTG--GAGGTATTCCTTCCTTAT 82716 ||||| |||||| ||||||| || || | ||| |||| || ||| |||| | |||| | Sbjct 12992 TCTAGCTGTTTTTCAGCAAA-ATAAGACATTGGTGATGTGGTGAGATATT--TCCCTTGT 13048 Query 82717 CTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGT----- 82771 ||| || || ||||| ||||| |||| ||||||| |||| || || | ||| Sbjct 13049 ATTGGATTTTGGCTTTGACATTCTCAAAAATATCATTGAGTTCAACCTCAAGAGTGATAG 13108 Query 82772 -------TATC-GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| ||||| | ||||| ||||| ||||| |||||||| Sbjct 13109 TCTTATATATCACTCTTGTCAGTCAAAGTCTTCACAAAGATCTGCAT 13155 >seq33301 Length=39358 Score = 86.0 bits (94), Expect = 1e-11 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTT-CTGTATATTATAATCAG 82641 ||||| ||||| | ||||| || ||||| ||||||| ||| | || || || ||| Sbjct 1072 ACCTCTCCTCAAGCAGAGAACCAACTGCAGGGTAGATTTTTTTCCAGATGTTGTAGACAG 1131 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | || ||||| | || ||||| |||||||| | || || ||||| | | Sbjct 1132 ACAGAGCTTGTCCATCTTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCAGGG 1191 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 || ||||| || || ||||||||||| | | || | ||| || ||| || || | Sbjct 1192 CAATGCCTTCTTTGTCCTGAATCTTTGCCCTGATGTTCTTAATGGTGTCACCGGGCTCCA 1251 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || || |||| || ||||| ||||| | ||| |||||||| Sbjct 1252 TTTCAGGTGTGATGCTCTTACCAGTCAAGGTCTTCATAAA-ATCTGCAT 1299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981374659275186