Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq22336 109 7e-19 seq22770 105 9e-18 seq411 105 9e-18 seq27188 104 3e-17 seq27089 104 3e-17 seq22337 104 3e-17 seq15216 104 3e-17 seq22561 98.7 1e-15 >seq22336 Length=2089399 Score = 109 bits (120), Expect = 7e-19 Identities = 72/80 (90%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 8653 CTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTC 8712 || ||||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| Sbjct 2058397 CTCATTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTC 2058456 Query 8713 GATTCCCCGACGAGGAGCAG 8732 |||||||||||| |||| || Sbjct 2058457 GATTCCCCGACGGGGAGGAG 2058476 Score = 105 bits (116), Expect = 9e-18 Identities = 76/85 (89%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 11719 GTGT-AACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACC 11776 |||| ||| || ||||||||||||||||||| ||||| |||| ||||| | ||||||||| Sbjct 2058390 GTGTCAACTCATTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACC 2058449 Query 11777 GGGGTTCGATTCCCCGACGAGGAGG 11801 ||||||||||||||||||| ||||| Sbjct 2058450 GGGGTTCGATTCCCCGACGGGGAGG 2058474 Score = 102 bits (112), Expect = 1e-16 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||| ||||||||||||| Sbjct 2072292 TTCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATT 2072351 Query 8717 CCCCGACGAGGAGCAG 8732 |||||||| |||| || Sbjct 2072352 CCCCGACGGGGAGAAG 2072367 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | |||||| |||||||||||||| Sbjct 2076455 TCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATTC 2076514 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 2076515 CCCGACGGGGAG 2076526 Score = 96.9 bits (106), Expect = 5e-15 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || ||||||||||||||||||| ||||| |||| ||||| | |||||| ||||||||||| Sbjct 2076452 CACTCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGA 2076511 Query 11786 TTCCCCGACGAGGAG 11800 |||||||||| |||| Sbjct 2076512 TTCCCCGACGGGGAG 2076526 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 2058473 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2058414 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 2058413 TACTAACGAGGA 2058402 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||| |||||||||||||| Sbjct 2072293 TCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATTC 2072352 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 2072353 CCCGACGGGGAG 2072364 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| ||||||||||| |||||| | |||| |||||||| | |||||| Sbjct 2076527 ACTCCCCGTCGGGGAATCGAACCCCGGCCTCCCGCGTGACAGGCGGGGATACTGACCACT 2076468 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 2076467 ATACTAACGAGGA 2076455 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| ||||||||||| |||||| | |||| |||||||| | ||||||| Sbjct 2072364 CTCCCCGTCGGGGAATCGAACCCCGGCCTCCCGCGTGACAGGCGGGGATACTGACCACTA 2072305 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 2072304 TACTAACGAGGA 2072293 >seq22770 Length=106231 Score = 105 bits (116), Expect = 9e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||| ||||||||||||| Sbjct 44674 TTCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATT 44733 Query 8717 CCCCGACGAGGAGCAG 8732 |||||||| ||||||| Sbjct 44734 CCCCGACGGGGAGCAG 44749 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 54020 TTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 54079 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 54080 CCCCGACGGGGAG 54092 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 104040 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 104099 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 104100 CCCCGACGGGGAG 104112 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 54021 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 54080 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 54081 CCCGACGGGGAGG 54093 Score = 100 bits (110), Expect = 4e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||| ||||||||||| Sbjct 1974 TACTCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGA 2033 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 2034 TTCCCCGACGGGGAG 2048 Score = 100 bits (110), Expect = 4e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||| ||||||||||||| Sbjct 8820 TTCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATT 8879 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 8880 CCCCGACGGGGAG 8892 Score = 100 bits (110), Expect = 4e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | |||||| |||||||||||||| Sbjct 17875 TCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATTC 17934 Query 8718 CCCGACGAGGAGCAG 8732 ||||||| |||| || Sbjct 17935 CCCGACGGGGAGGAG 17949 Score = 100 bits (110), Expect = 4e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||| ||||||||||||| Sbjct 25047 TTCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATT 25106 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 25107 CCCCGACGGGGAG 25119 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 104041 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 104100 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 104101 CCCGACGGGGAG 104112 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||| |||||||||||||| Sbjct 17875 TCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATTC 17934 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 17935 CCCGACGGGGAGG 17947 Score = 96.9 bits (106), Expect = 5e-15 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||| ||||||||||||| Sbjct 33986 TTCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATT 34045 Query 8717 CCCCGACG 8724 |||||||| Sbjct 34046 CCCCGACG 34053 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||| |||||||||||||| Sbjct 1977 TCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATTC 2036 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 2037 CCCGACGGGGAG 2048 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||| |||||||||||||| Sbjct 8821 TCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATTC 8880 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 8881 CCCGACGGGGAG 8892 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||| |||||||||||||| Sbjct 25048 TCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATTC 25107 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 25108 CCCGACGGGGAG 25119 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||| |||||||||||||| Sbjct 44675 TCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATTC 44734 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 44735 CCCGACGGGGAG 44746 Score = 95.1 bits (104), Expect = 2e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 54092 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 54033 Query 139413 TACTAACGAGGATTTTGGTA 139432 |||||||||||| ||||| Sbjct 54032 TACTAACGAGGAAGGTGGTA 54013 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 104112 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 104053 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 104052 TACTAACGAGGA 104041 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| ||||||||||| |||||| | |||| |||||||| | ||||||| Sbjct 17946 CTCCCCGTCGGGGAATCGAACCCCGGCCTCCCGCGTGACAGGCGGGGATACTGACCACTA 17887 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 17886 TACTAACGAGGAT 17874 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| ||||||||||| |||||| | |||| |||||||| | |||||| Sbjct 25120 ACTCCCCGTCGGGGAATCGAACCCCGGCCTCCCGCGTGACAGGCGGGGATACTGACCACT 25061 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 25060 ATACTAACGAGGA 25048 Score = 91.5 bits (100), Expect = 2e-13 Identities = 61/67 (91%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||| |||||||||||||| Sbjct 33987 TCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGGCCGGGGTTCGATTC 34046 Query 11789 CCCGACG 11795 ||||||| Sbjct 34047 CCCGACG 34053 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| ||||||||||| |||||| | |||| |||||||| | ||||||| Sbjct 2048 CTCCCCGTCGGGGAATCGAACCCCGGCCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1989 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 1988 TACTAACGAGGA 1977 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| ||||||||||| |||||| | |||| |||||||| | ||||||| Sbjct 8892 CTCCCCGTCGGGGAATCGAACCCCGGCCTCCCGCGTGACAGGCGGGGATACTGACCACTA 8833 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 8832 TACTAACGAGGA 8821 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| ||||||||||| |||||| | |||| |||||||| | ||||||| Sbjct 44746 CTCCCCGTCGGGGAATCGAACCCCGGCCTCCCGCGTGACAGGCGGGGATACTGACCACTA 44687 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 44686 TACTAACGAGGA 44675 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 |||| ||||||||| ||||||||||| |||||| | |||| |||||||| | |||||| Sbjct 34059 ACTCTCCGTCGGGGAATCGAACCCCGGCCTCCCGCGTGACAGGCGGGGATACTGACCACT 34000 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 33999 ATACTAACGAGGA 33987 >seq411 Length=419930 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| ||| Sbjct 308920 TTCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 308979 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 308980 CCCCGACGGGGAG 308992 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 139348 CACAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAAC 139407 |||| |||| ||||||||| | |||||||||||||||| | |||| |||||||| |||| Sbjct 308997 CACATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAAC 308938 Query 139408 CACTATACTAACGAGGA 139424 ||||||||||||||||| Sbjct 308937 CACTATACTAACGAGGA 308921 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 308921 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 308980 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 308981 CCCGACGGGGAG 308992 >seq27188 Length=1535227 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 672371 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 672430 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 672431 CCCGACGGGGAG 672442 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 672371 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 672430 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 672431 CCCGACGGGGAG 672442 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| ||||||||| Sbjct 672442 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 672383 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 672382 TACTAACGAGGA 672371 >seq27089 Length=5919 Score = 104 bits (114), Expect = 3e-17 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 4187 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 4128 Query 11788 CCCCGACGAGGAGG 11801 |||||||| ||||| Sbjct 4127 CCCCGACGGGGAGG 4114 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 4186 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 4127 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 4126 CCCGACGGGGAG 4115 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409 || |||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||| Sbjct 4112 CACCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 4171 Query 139410 CTATACTAACGAGGA 139424 ||||||||||||||| Sbjct 4172 CTATACTAACGAGGA 4186 >seq22337 Length=2413889 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 10896 TACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 10955 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 10956 TTCCCCGACGGGGAG 10970 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 10899 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 10958 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 10959 CCCGACGGGGAG 10970 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 10970 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 10911 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 10910 TACTAACGAGGA 10899 >seq15216 Length=4286460 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 2068447 TACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 2068388 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 2068387 TTCCCCGACGGGGAG 2068373 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 2068444 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2068385 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 2068384 CCCGACGGGGAGG 2068372 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 2068373 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2068432 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 2068433 TACTAACGAGGA 2068444 >seq22561 Length=2567171 Score = 98.7 bits (108), Expect = 1e-15 Identities = 67/74 (91%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 ||||||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||| Sbjct 2546814 AGTCCTCGTTAGTATAGTGGTGAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGAT 2546873 Query 11787 TCCCCGACGAGGAG 11800 |||||||||||||| Sbjct 2546874 TCCCCGACGAGGAG 2546887 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 2546816 TCCTCGTTAGTATAGTGGTGAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 2546875 Query 8718 CCCGACGAGGAG 8729 |||||||||||| Sbjct 2546876 CCCGACGAGGAG 2546887 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 2555435 TCCTCGTTAGTATAGTGGTGAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 2555494 Query 8718 CCCGACGAGGAG 8729 |||||||||||| Sbjct 2555495 CCCGACGAGGAG 2555506 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 2555434 GTCCTCGTTAGTATAGTGGTGAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 2555493 Query 11788 CCCCGACGAGGAG 11800 ||||||||||||| Sbjct 2555494 CCCCGACGAGGAG 2555506 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||||||||||||| |||||||||||||| ||| | |||| ||| |||| | |||||| Sbjct 2555507 ACTCCTCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTCACCACT 2555448 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 2555447 ATACTAACGAGGA 2555435 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||||||||||||| |||||||||||||| ||| | |||| ||| |||| | ||||||| Sbjct 2546887 CTCCTCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTCACCACTA 2546828 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 2546827 TACTAACGAGGA 2546816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652551232014560