Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq15323 82.4 1e-10 >seq15323 Length=1134477 Score = 82.4 bits (90), Expect = 1e-10 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||| ||| |||||||||| ||||||||||| || ||| || || || ||||| Sbjct 892933 CTCATCTTTACTAGTGTACTCTACTATTTCTGTACACAAATTGCTACATTTGATGGTCCC 892874 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 || |||| || || || ||| || || || || || |||||||| || ||||| Sbjct 892873 CAGGTTCTGCTGATTGCTTTTCCGATTACAGCTGTCTTTATATAGCATGTACGGGGTCCC 892814 Query 111385 CGTCTCCGTCTGTGA 111399 ||||||||||| || Sbjct 892813 TGTCTCCGTCTGGGA 892799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627749589710400