Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq6823 123 2e-23 >seq6823 Length=3687145 Score = 123 bits (136), Expect = 2e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 3244 AGTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGA 3303 ||| || || ||||| ||| | |||||||| ||||||||||| ||||| || |||||||| Sbjct 2986544 AGTAGTGGAAGAGCTGTTCAGGGATGGGGTGAACTGGGGGCGGATTGTGGCCTTCTTTGA 2986485 Query 3304 GTTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAA 3363 ||||||||||||||||||||||| |||||||| | | || | | || || |||| Sbjct 2986484 ATTTGGTGGTGTTATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCTCTGGTGGACAG 2986425 Query 3364 CATTGCCGCGTGGATGACAGA 3384 ||| ||| ||||||||| || Sbjct 2986424 CATAGCCCTGTGGATGACTGA 2986404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414295079641336