Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq152859 95.1 3e-14
seq160254 91.5 3e-13
seq156661 91.5 3e-13
seq155848 91.5 3e-13
seq160609 89.7 1e-12
seq152500 89.7 1e-12
seq106403 89.7 1e-12
seq83570 89.7 1e-12
seq152416 87.8 4e-12
seq7 87.8 4e-12
seq152778 86.0 1e-11
>seq152859
Length=288289
Score = 95.1 bits (104), Expect = 3e-14
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 165705 CGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTT 165764
|| ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||
Sbjct 112893 CGGTTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTT 112834
Query 165765 CGAGCCCCACGATGGGC 165781
||||||||||| |||||
Sbjct 112833 CGAGCCCCACGTTGGGC 112817
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 86575 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 86634
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 86635 CCCACGTTGGGC 86646
>seq160254
Length=20074
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 2110 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2051
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 2050 CCCCACGTTGGGC 2038
>seq156661
Length=27803
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 25563 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 25622
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 25623 CCCCACGTTGGGC 25635
>seq155848
Length=31530
Score = 91.5 bits (100), Expect = 3e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766
|| ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct 25354 CTCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 25295
Query 165767 AGCCCCACGATGGGC 165781
||||||||| |||||
Sbjct 25294 AGCCCCACGTTGGGC 25280
>seq160609
Length=28719
Score = 89.7 bits (98), Expect = 1e-12
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
||| ||| ||||||||||||||||||| |||||| || |||| ||||||||||||||
Sbjct 18703 TTGGCCGGCTAGCTCAGTCGGTAGAGCATCAGACTCTTCATCTCAGGGTCGTGGGTTCGA 18762
Query 165768 GCCCCACGATGGGC 165781
|||||||| |||||
Sbjct 18763 GCCCCACGTTGGGC 18776
>seq152500
Length=393280
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 71581 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 71640
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 71641 CCCACGTTGGGC 71652
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 73464 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 73523
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 73524 CCCACGTTGGGC 73535
>seq106403
Length=1065
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 388 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 447
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 448 CCCACGTTGGGC 459
>seq83570
Length=1832
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 598 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 539
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 538 CCCACGTTGGGC 527
>seq152416
Length=123331
Score = 87.8 bits (96), Expect = 4e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||| |
Sbjct 65343 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGTG 65284
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 65283 CCCCACGTTGGGC 65271
>seq7
Length=40039088
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775
|||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||
Sbjct 38727783 CTAGCTCAGTCGGTAGAGCGTGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCCCCACG 38727724
Query 165776 ATGGGC 165781
|||||
Sbjct 38727723 TTGGGC 38727718
>seq152778
Length=1304051
Score = 86.0 bits (94), Expect = 1e-11
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766
|||||||| ||||||||||||||||||| |||| |||||| |||||||||||||
Sbjct 423286 CTTGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCG 423227
Query 165767 AGCCCCACGATGGGC 165781
||||||||| |||||
Sbjct 423226 AGCCCCACGTTGGGC 423212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1055111238781020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |