Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 3e-20
>seq1
Length=47594283
Score = 113 bits (124), Expect = 3e-20
Identities = 91/110 (83%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||||||||| ||||||| || | |||||||||| |||| ||||| || | ||||||||
Sbjct 12103592 CTTTAGTTCTCTGCTGAGCACTATATTAATTCTGTCTTTCAAAGGTCGACTTTTCTCAGG 12103533
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399
||| |||||||| ||||| |||||||| ||||| | ||| |||||| |||
Sbjct 12103532 AATGGAGAACCAGGTCTTCTTACCCATTATCACCAGATTTTGTTTACCTG 12103483
Score = 102 bits (112), Expect = 6e-17
Identities = 70/79 (89%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 4056 AAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCAT 4115
|||||| |||||||||| ||||| |||||||||||| ||||||| ||||||||||||||
Sbjct 12115595 AAGTTTATATTTCTCTAAATCAATTTCTGGAAAAAATGTGTCACTTTCAAAGTCTTGCAA 12115536
Query 4116 GATCCTAGTCACAAACAGT 4134
|| ||||||||||| |||
Sbjct 12115535 AATTCTAGTCACAAATAGT 12115517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360369972176654
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |